Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00873 ATGCAAGGCAAAGAAATGGAAGGGTTGTCGTCTTCATCGGCGATCGCGCAGAAAACATGGGAGCTCGAGAATAACATCATCCCCATGGACACTCCGGGCGCCGCCGCTTCCTCCTCCTCCACCACAACCAACGCCGACGACTCCATCTTCTACTACGACGAGGCCGGCCAGAACGAGTTCCAGCGCGACAAGCCCTGGGCCAACGATCCTCATTACTTCAAACGCGTCAAGATCTCCGCACTCGCGCTCCTCAAGATGGTCGTCCACGCGCGCTCCGGTGGCACCATCGAGGTCATGGGCCTAATGCAGGGCAAGACCGACGCCGACGCCATCATCGTCATGGACGCCTTCGCTCTCCCCGTCGAAGGCACCGAAACGCGCGTTAATGCTCAGGCCGATGCGTACGAGTACATGGTCGATTATTCCCAGACAAACAAACAGGCTGGGCGGTTGGAGAATGTTGTGGGATGGTATCACTCTCATCCTGGGTACGGATGCTGGTTGTCGGGGATCGATGTTTCGACCCAGATGTTGAATCAGCAGTTTCAGGAGCCGTTTCTGGCTGTTGTGATTGATCCCACGAGGACTGTTTCGGCGGGGAAGGTTGAGATTGGGGCTTTCAGGACTTACCCTGAAGGGTATAAGCCTCCGGATGAGCCTATTTCTGAGTATCAGACTATTCCTCTCAATAAGATTGAGGACTTTGGTGTCCACTGTAAACAGTATTATGCCTTGGATATCACTTATTTTAAGTCATCTCTTGATTCGCACCTCTTGGATCTTCTGTGGAACAAGTACTGGGTGAATACATTGTCGTCTTCTCCTCTGTTGGGTAATGGAGATTATGTTGCTGGGCAAATCTCTGATTTAGCTGAGAAGCTAGAACAAGCAGAGAATCAGTTGGCACACTCGCGCTTTGGGCCACTAATAGCACCGACACAAAGAAAGAAAGAGGAAGAATCTCCACTTGCTAAAATTACTCGTGACAGTGCAAAAATAACTGTGGAGCAAGTGCATGGTCTGATGTCACAGGTCATCAAGGACATTCTGTTTAACTCTGTTCATCAAGCAAATAGAAGTCGAACAGAACCAACTGGTCCTGAACCAATGATTGAAAGCTGA 1122 0.5062 MQGKEMEGLSSSSAIAQKTWELENNIIPMDTPGAAASSSSTTTNADDSIFYYDEAGQNEFQRDKPWANDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDADAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGPLIAPTQRKKEEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVHQANRSRTEPTGPEPMIES 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00873 373 ProSiteProfiles MPN domain profile. 76 213 IPR037518 -
Spst9g00873 373 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 73 184 IPR000555 GO:0005515|GO:0008233|GO:0008237
Spst9g00873 373 FunFam COP9 signalosome complex subunit 5 10 278 - -
Spst9g00873 373 CDD MPN_RPN11_CSN5 65 337 - -
Spst9g00873 373 SMART pad1_6 75 212 IPR000555 GO:0005515|GO:0008233|GO:0008237
Spst9g00873 373 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 61 359 - -
Spst9g00873 373 Gene3D Cytidine Deaminase, domain 2 9 278 - -
Spst9g00873 373 Pfam Cop9 signalosome subunit 5 C-terminal domain 272 352 IPR040961 -
Spst9g00873 373 SUPERFAMILY JAB1/MPN domain 75 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00873 Spst-Chr9 7648066 7652144 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00873 K09613 - gmx:100817371 732.25