Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00850 ATGCAGGCAGCAAAAGAAGGTGACAGCCTCGACCGAAATTATGAAGGGAATGATTTGGAGAAGGAAATTGTAAATCTGCGTGGACGCTGGGAACTCGCGTCTGTTCTCAACTTTTTGGATGTATTTGGTCCGATAATTGGAAAAGATTTGAAACTCTCTGCTGAGGATATTGAGATTGGGCTTGTTAAGCCTGACGCTTCCCTTGCTCGGCTTCATATTCAGCTTTTGAAATTATTGATTGATGTGTCTGTGCATGCTATTGGTATCGACAATACGATGGGGGACTTGTGCAAATGTAATTTTTGCAAGGGAATGCCACCTGTGAGTAAAACGCTAGAGGATTCTGATAAGTGGGTGACTGCACTCTGTAAGAAACTTATTATGTGGTGGCCATGGGTTGCTGAGGGGGAGATTCCACTTGTACCATCTAAAGGACATGAGATATCCCAGTACAAGGAAATTGATCCGTCAGATCGTTTACTACTGCTAAAAGCGCTTTGTGAAGTTAGAGCTGATCAACATGATGCAGTGTCATACATAAATGATGCTTTGAAAGAAGGAACTCAAATTTCATCTTTTCGCAAAGATGCCTTAGGAAGAGATAGAACTGGCACATCTTATTGGTATGATGCAACTTCAGAAGGTCGTAGTCACAGATTATACAGGGAAGTTATTACATTAGACTCAATTCCAAAAGAAAAGGATGACAGGCGTTTATCGCTTCCCACTATTCAATGGGAAACCCTTGCTTCCAATCTTGAAGATTTTTCTAAAGTAGCTGAAAAATTCTCACTCAGCAAGTCTGCTGTGGAAGTTTCTGTTAGCACAAAGCTTAAGAGCGATGCTATTCCTGCTCTTGAAAAGCTTCGGAAGAAGAAAGAAAGAGCAATAAAGCAAAAACAGAGGCAGGATATGCTGTTAAAGGATGTTCGGAACTCATATTGTTCTGGAAATACACGTGCTTGTCGCACTCGAAGGCCTATTTGTTATACATTTGAAGCTTACGATCGAACGATGAAGGAGGCAATACAGCTGACAAATAAAAGGAAAAAGACTCCTGTCGCCGACCAAGATAAAACCAGAGGATCAGAAGATCCATCCAACACGAAAGATGTTTCAACAGACAGTGATTCTGAACGGGATGTTTTGCAAATATCTGATAGTGATGATGATGTTGGTTCTGAAGTTGAGAATTATGGTAGCAGCGAGGAAGATGATGTTGATGGTGAGTTGGGCAACTCAGAAGCTCCCTCAAGCCATGCAGTTTCTTATCCCAAGGGGGTTCGCTGCAGCAAGCGGCTAGCTGGAATTCCTAGCCTCGCTATTTTAGAAAGTAGAGGCTTAACTACAAAGCAAACATTGAGACAAAGACCCACCCGCAATTCTGCTTTAGAATCAATCATGATATCAGATTCAGAGGACGAATAA 1428 0.4181 MQAAKEGDSLDRNYEGNDLEKEIVNLRGRWELASVLNFLDVFGPIIGKDLKLSAEDIEIGLVKPDASLARLHIQLLKLLIDVSVHAIGIDNTMGDLCKCNFCKGMPPVSKTLEDSDKWVTALCKKLIMWWPWVAEGEIPLVPSKGHEISQYKEIDPSDRLLLLKALCEVRADQHDAVSYINDALKEGTQISSFRKDALGRDRTGTSYWYDATSEGRSHRLYREVITLDSIPKEKDDRRLSLPTIQWETLASNLEDFSKVAEKFSLSKSAVEVSVSTKLKSDAIPALEKLRKKKERAIKQKQRQDMLLKDVRNSYCSGNTRACRTRRPICYTFEAYDRTMKEAIQLTNKRKKTPVADQDKTRGSEDPSNTKDVSTDSDSERDVLQISDSDDDVGSEVENYGSSEEDDVDGELGNSEAPSSHAVSYPKGVRCSKRLAGIPSLAILESRGLTTKQTLRQRPTRNSALESIMISDSEDE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00850 475 Coils Coil 283 306 - -
Spst9g00850 475 MobiDBLite consensus disorder prediction 388 411 - -
Spst9g00850 475 MobiDBLite consensus disorder prediction 344 387 - -
Spst9g00850 475 PANTHER REMODELING AND SPACING FACTOR 1 8 415 IPR028938 GO:0006355|GO:0031213
Spst9g00850 475 MobiDBLite consensus disorder prediction 344 426 - -
Spst9g00850 475 MobiDBLite consensus disorder prediction 451 475 - -
Spst9g00850 475 MobiDBLite consensus disorder prediction 451 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00850 Spst-Chr9 7486204 7492712 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00850 - - tpra:123899543 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00850 9 7486204 7492712 Spst9g00850 9 7486204 7492712 ECH