Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00845 ATCACCACCTGGTATAGGGTGAAAGCAACAATAATCCTCCCTTTGTATTGGTACGTGAATCAATTAACCAATGAATCAATCCTCTCTCTCCATTTATTTATTTTCTTGCACATTATTGGTGTTGGAAAAACCGAGATTGTAGCCTTGAGAGGTTCAACTGACCAGGACCGTGACGCATTGTGTTTTGAGATAATGCTGAGGAAGAGGAACAGGTCAGTGCAGAAGGAGCAACACCACATGAGTAATCTGACACAGAGTGAAGCCAATTCAGAGCACTATTCTCAAACTCATCATGCTTTGGGGCGCAACAACATCAAGGGCCACTCAATTTTCAATGTTCCTTGTCTGTTTGTGGGTTTAGGTCCAAACGGGTTGTTGGATTCTGATTCAGTTAGGAGTCCCACTTCTCCACTTGATGCTAGAGTTCTTTCAAATCTTGGCAACCCCGTTAGGAAGCCAAGATCTTCACCTCATGAAGGGCACCCAAGGAGTTGGGATTGTTGCAAAGTAGGTCTAGGCATTGTGGAGTCTTTGGAAGAGTCTTCTAGGTTTTCTGGGAAAATTCTCCAGTCACCAGAGAGTAAGAGGGTTAATCTCAGTTCTCAAATGATGATCAAGGCCCCAAATTGCCAAATCCATAGGGATTTTCTTGAGGGATCTAAGTCTTTACCCAAAGATTTTTGTAAGGCTCCTTATGCCCCCCGAAATGGATCTATTAACCACAAGGGTGAATCTGAGTCCACTGTTCTTTTTGAGATTGGGGAAAGTGGCCTTGAGCATGAACTGTTTGGGAGAACCAGGTCTTGTTCATTGGACTCATGCAGTCAACTGAAAGAGCTCTCTGGCTTAAACACTTCCTTCTCTGATTCAGACACTGATAATTTTGCTGTGAAAGATGTGAGTATCCAATTGAGCTCTCCTCCTCATTTTAACGGGGGAAGCCAGAAATCAAATATATTCCCACCTACAAAGTTGAACACAAACACTCTTTCCATTAGCTCTTCCAATGAATTTATTAAGTCTCTGTCTGCTAGTGAGATTGAACTCTCCGAGGACTATACATGTGTGATTTCTCATGGCCCCAATCCCAAAACAACTCACATTTTTGGGGATTGCATTCTAGAGACTTATTCTAATACATTCAAAATCCATTCTAAGAACGAAGAGAAGGAGATGGGAGTTAACCCTATTGCTAACAGGGTAGGGAGTTCCAACCCATATCCCTCGAGTGGCTTCTTGAGTTTCTGCCACCACTGCAACAAGAAACTAGATGAGGGGAAGGACATTTATATTTATGGGGGTGAAAAGGCATTTTGCAGTTTAACTTGCCGTGCCATGGAGATCATGATTGATGAGGAACTAGAGAAATCCAACACCAACCCTCCTTGTGAAAACTCTCCAAAGCCAAAACTTGGTGAGCTACTTTTTGAAACAGGCATTGTCACAGCTACATAA 1455 0.4268 ITTWYRVKATIILPLYWYVNQLTNESILSLHLFIFLHIIGVGKTEIVALRGSTDQDRDALCFEIMLRKRNRSVQKEQHHMSNLTQSEANSEHYSQTHHALGRNNIKGHSIFNVPCLFVGLGPNGLLDSDSVRSPTSPLDARVLSNLGNPVRKPRSSPHEGHPRSWDCCKVGLGIVESLEESSRFSGKILQSPESKRVNLSSQMMIKAPNCQIHRDFLEGSKSLPKDFCKAPYAPRNGSINHKGESESTVLFEIGESGLEHELFGRTRSCSLDSCSQLKELSGLNTSFSDSDTDNFAVKDVSIQLSSPPHFNGGSQKSNIFPPTKLNTNTLSISSSNEFIKSLSASEIELSEDYTCVISHGPNPKTTHIFGDCILETYSNTFKIHSKNEEKEMGVNPIANRVGSSNPYPSSGFLSFCHHCNKKLDEGKDIYIYGGEKAFCSLTCRAMEIMIDEELEKSNTNPPCENSPKPKLGELLFETGIVTAT 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00845 484 PANTHER FCS-LIKE ZINC FINGER 11 65 483 IPR044585 -
Spst9g00845 484 Pfam zinc-finger of the FCS-type, C2-C2 404 453 IPR007650 -
Spst9g00845 484 MobiDBLite consensus disorder prediction 73 96 - -
Spst9g00845 484 ProSiteProfiles Zinc finger FLZ-type profile. 411 455 IPR007650 -
Spst9g00845 484 MobiDBLite consensus disorder prediction 77 96 - -
Spst9g00845 484 MobiDBLite consensus disorder prediction 130 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00845 Spst-Chr9 7418173 7425870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00845 - - gmx:100779553 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00845 9 7418173 7425870 Spst9g00845 9 7418173 7425870 ECH