Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00833 ATGGAGCAAACCCATGTTGTGGCTTCAAGACTCAATGCAACTTTGGTGGTTGTTGCATTGGTTCTTATTCAAGGTAAACCCATCACATTAATCAATTCTCCATGCTGTTATTTCAACTTTGATCTCATTCATCATCATCTCCTCGTTAACCATCCCACAGGAGCACATGCAATTGCAAATATCGGTGTTAATTATGGGACAGTTGCAAACAACCTTCCTCCACCTTCGAAGGTAGCAAAATTTCTATCCAAATCCACCATAATCAACAGGGTGAGACTCTTCGATGCCAACCCTGAAATTCTACACGCTTTTGGAAACACTGGCATAGAGGTAACCATAACCGTCCCAAACGACCAAATCCCCGACATAACTAACTTAACCTTCGCACAGCAATGGGTCAAAACCAACGTCCAACCGTTCCTCCCCGCCACCAAACTAATCCGAATCCTCGTAGGCAACGAGGTGCTGTCCACCGCCAACAAACTCCTCATCAGCAACCTCGTACCCGCCATGCAAACCCTTCACGTGGCTCTCGTCACAGCATCATTGGACAACAACGTTAAAGTCTCCTCTCCACACTCTCTGGGGATTTTGTCAAACTCAAGCCCCCCCTCAACTGCCAAGTTTAGACAAGGCTACGACACGCACGTGATAAAACCAATGCTTAGTTTTCTCAAAGATTCGAATGCACCCTTCATGGTTAACCCTTATCCTTTTTTTGGATCCTCTGCCAGCAACCTTGATTATGCACTCTTTCGGACCAATTCGGGTGTATTTGACGACAACACCAAACTCCGATACACGAACATGTTGGACGCGCAACTTGACGCTGTTTATTCGGCGATGAAGGTTTTAGGCTTTGAGGATGTTGAGATTGTCATTGCCGAAACGGGCTGGCCCTCCGCCGGTGACCCGCCCCAAGTTGGTGTTGACCCGATGACTGCTTCTGAGTACAATGGGAATCTCATACGACACGTCACTTCTGGGGCTGGAACTCCTCTCATGCCCAACCGGACTTTTGATACCTATGTTTTTGCTTTGTTTGATGAAAATTTAAAGCCCGGCCCAACTTGTGAGAGGAACTTTGGGCTCTTCTGGCCCAATATGAGTCTCGTTTATGACGTCCCAATAATGAGGAACAATGTAGCTGTCGTTGCTAATAGACATTGTTATAAAGGTTTTTTGTCCATCATGCTTGTCTTCGCCTTCATTTGTACTTGGCTTTAA 1227 0.4613 MEQTHVVASRLNATLVVVALVLIQGKPITLINSPCCYFNFDLIHHHLLVNHPTGAHAIANIGVNYGTVANNLPPPSKVAKFLSKSTIINRVRLFDANPEILHAFGNTGIEVTITVPNDQIPDITNLTFAQQWVKTNVQPFLPATKLIRILVGNEVLSTANKLLISNLVPAMQTLHVALVTASLDNNVKVSSPHSLGILSNSSPPSTAKFRQGYDTHVIKPMLSFLKDSNAPFMVNPYPFFGSSASNLDYALFRTNSGVFDDNTKLRYTNMLDAQLDAVYSAMKVLGFEDVEIVIAETGWPSAGDPPQVGVDPMTASEYNGNLIRHVTSGAGTPLMPNRTFDTYVFALFDENLKPGPTCERNFGLFWPNMSLVYDVPIMRNNVAVVANRHCYKGFLSIMLVFAFICTWL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00833 408 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 48 383 IPR044965 GO:0004553|GO:0005975
Spst9g00833 408 Pfam Glycosyl hydrolases family 17 61 375 IPR000490 GO:0004553|GO:0005975
Spst9g00833 408 Gene3D Glycosidases 59 383 - -
Spst9g00833 408 ProSitePatterns Glycosyl hydrolases family 17 signature. 290 303 IPR000490 GO:0004553|GO:0005975
Spst9g00833 408 SUPERFAMILY (Trans)glycosidases 61 375 IPR017853 -
Spst9g00833 408 FunFam Glucan endo-1,3-beta-glucosidase 3 60 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00833 Spst-Chr9 7273981 7275207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00833 57 381 Miscellaneous Gene Families AT3G46570 57.317 2.25e-120 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00833 - - gmx:100795377 623.239