Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00829 ATGACTAACAAAGATAAAGGCAGATACTCATTTGCAGTCTTTACAATGCCAAAGCAAGAGATGGTTGTTGAGGTGCCTGGTGAGCTCGTGGATGACAAAATCCACCCTCTTTGTTATCATCCATTCAATTATGGAGAGTTTGTGAATTACTTTGCTTCAACTCTCACACCAAATGCACTTGAAGAATTTGCAAGTTGCTGCGAGAGAGAGCAAAGGAAAAAAAGAGTAGAGCAAAGCATGGTGGAGCACGAAGACTCAAACTCAAGCACCGTCCAGAAGATTCTAGATCTTCTCTACGCCACCGGCTACGTCCACGCCACAAATTCCGATGTGCCACCGTCTGAAAAAGTTGCCACCGGCCTCTCCCAGTGCATCGCCGCCATAACGCAAGTATCTCTTTCTCCCTTCCTTTCAATCAATTTGGTTGAGGTTTTCTCTGCACTCAATCCCCCTAACTCGCCTTGCAGAGACCATGACAACACACTTGGCATCGAGGAATCTTTAAGATTAGTTGGATGTCCGCACCCTCTTCGACTCTCTCACGTTCAAGATCTCGAAGCCGACGCCCTTTTTCCTGTAATTCAGTGGCTCACGTCACAGCTTCCGCAAAATCAAGAACAGCGTGCCAGCGAGGTTTGTCATGCTGAAAATACCATTGAAGTGAATGAGTGTAGAACTTCGATTGAGGCGTTGAGTGGCAACTTGGATGAACTGGTTGGTGAGATGGATAAGATGATAACCAATCAGCGGAAGATAAGCGTTGTGAAGCAATTAACTATTCTACAAGAGAGAATCAATAACGAGGGTGCTGATTCTGCAGCACAGAAGTTGGCTTCTTTAATGACGTCTTTGAAGGATCTTGAAAAGCAGGAAAATTACTTTCAGTCCTATCGTGATTCTAGACATGCAGAACTACAAGCTGATATTGGTGAATTAGAGAGGCAAATAACAAATGACAGTGATAACAAGAACCTATCTGATGGACTACATAATTCTTTTAATGAATTAGTTGAAAAAGTCAATTTGATGAAAAAGCAACTTGCTGCTAGACTGAGGGATATTGTGGCATTAAGACGTCAGATTGATGACCTACCATGCCAATCAGAAATCATCCAGTATGAATGTCGGCTCTCTGAACTGTATGCGCAAATACAGGGGAAACATCGACAAACTCGGAAATACTATGCTACCTACAATGCTCTCTTGGAAATAAAAGAATTGATGTTAAAGCAAACATCTTTGTTGAATTCAATCATTTCCCAGTTTCAAGAGGCCTTTAGTAGCACTGATGGGCGTATAAAACTTGTTCATTCCATGGAAGGAATTGTCAAGGGAAGTCAACAGAAGCTAGAAAGGGTTCATTTAGGATTTCAAGAAGAAGAGAGAATCCGCAATGATCTAAAGGATAGGTATGCTGCAGCAATCGGTGAGCAGAAGCGCTGCTATTCTCTGTTCAAAGCTTTTCAGATTTCTTTAATGACCAGGCCCAATGTGCAAAGAAATAGAGGTTTCAGTGTCAAAGTTCCAAGTGATAATTGGCGTCAAAGCAAGAGTTGCGCACGTTGTGGGAAGCACAATGACTGTATACTGGGAAGACGTCACATCTAG 1608 0.426 MTNKDKGRYSFAVFTMPKQEMVVEVPGELVDDKIHPLCYHPFNYGEFVNYFASTLTPNALEEFASCCEREQRKKRVEQSMVEHEDSNSSTVQKILDLLYATGYVHATNSDVPPSEKVATGLSQCIAAITQVSLSPFLSINLVEVFSALNPPNSPCRDHDNTLGIEESLRLVGCPHPLRLSHVQDLEADALFPVIQWLTSQLPQNQEQRASEVCHAENTIEVNECRTSIEALSGNLDELVGEMDKMITNQRKISVVKQLTILQERINNEGADSAAQKLASLMTSLKDLEKQENYFQSYRDSRHAELQADIGELERQITNDSDNKNLSDGLHNSFNELVEKVNLMKKQLAARLRDIVALRRQIDDLPCQSEIIQYECRLSELYAQIQGKHRQTRKYYATYNALLEIKELMLKQTSLLNSIISQFQEAFSSTDGRIKLVHSMEGIVKGSQQKLERVHLGFQEEERIRNDLKDRYAAAIGEQKRCYSLFKAFQISLMTRPNVQRNRGFSVKVPSDNWRQSKSCARCGKHNDCILGRRHI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00829 535 Coils Coil 270 290 - -
Spst9g00829 535 Coils Coil 302 322 - -
Spst9g00829 535 Gene3D - 1 81 IPR027443 -
Spst9g00829 535 Coils Coil 228 248 - -
Spst9g00829 535 PANTHER FIDIPIDINE 73 208 IPR039116 -
Spst9g00829 535 Pfam CCDC93, coiled-coil domain 92 253 IPR019159 -
Spst9g00829 535 SUPERFAMILY Clavaminate synthase-like 2 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00829 Spst-Chr9 7230722 7237899 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00829 - - gmx:100806690 577.015