Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00827 ATGGCTTTAGAAGACGGGAGTGAGGAGTGGAAAGAAATGAGCAAGAAAGTGAGAGAAGCATGTGAGAGTCATGGTTGCTTCCTCTTGATGTGTGATGCGATCATCCCCAAGAGTGTGTGTGAAGAGATGTTTAATAATTTGAAAGCTTTATTTGATTTGTCTGAAGAAACAAAACAGCAACACATGAGTCCAAAACCTTACAGGAGCTACAATGGCAAGAACTCAGTCATTCCCTTCTGTGAAAGCTTTGGGTTCGATGATGTTCCTCTCTCAGCTACTGCTGAAGCCTTCACTAACCTCATGTGGCCTCAAGGAAACACACCTTTCTGTTTTTCACGATTGATCAAGTACAAAGTTCCTGAAAGCAATAATGACTCCCAGACTTGTCTTCCACCTCACACAGATAATAGTGCTTTAACCATTTTATGCCAAAAAGATGTCCAAGGACTCCAGGTGTTATCCAAAACAGACAAATGGATTGAATTGGAGATACCCCCTGATGGCTTTGTAGTTCTTGTTGGTGATATACTCAAGGCATGGAGCAACGGGAGGCTTCATGCAGTCACCCACAGAGTGATGTTGGGAGGAGAGAAAGAGAGATACTCATTTGGACTTTTTGCAATGCCAAAGGAAGAGATGAACATTGAGGTGCCCGATGAGTTAGTGGATGACAAAGTTCATCCCTTACGTTACCATCCCTTCAATTATGGAGAGTACTTCAACTACTTTGTTTCAAATCCCATAGAAGCTCTTGAAGTGTTTGCAGGTGTTTGA 774 0.4238 MALEDGSEEWKEMSKKVREACESHGCFLLMCDAIIPKSVCEEMFNNLKALFDLSEETKQQHMSPKPYRSYNGKNSVIPFCESFGFDDVPLSATAEAFTNLMWPQGNTPFCFSRLIKYKVPESNNDSQTCLPPHTDNSALTILCQKDVQGLQVLSKTDKWIELEIPPDGFVVLVGDILKAWSNGRLHAVTHRVMLGGEKERYSFGLFAMPKEEMNIEVPDELVDDKVHPLRYHPFNYGEYFNYFVSNPIEALEVFAGV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00827 257 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 101 - -
Spst9g00827 257 Pfam 2OG-Fe(II) oxygenase superfamily 117 207 IPR044861 -
Spst9g00827 257 Gene3D - 93 253 IPR027443 -
Spst9g00827 257 Pfam non-haem dioxygenase in morphine synthesis N-terminal 7 72 IPR026992 -
Spst9g00827 257 Gene3D - 1 81 IPR027443 -
Spst9g00827 257 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 106 209 IPR005123 -
Spst9g00827 257 SUPERFAMILY Clavaminate synthase-like 4 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00827 Spst-Chr9 7201926 7203288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00827 133 239 Glycosyltransferase AT5G59530 34.545 9.22e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00827 - - gmx:100790408 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01599 8 18391562 18392804 Spst9g00827 9 7201926 7203288 PCT