Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00819 ATGTCAGGAAAAGGGGCTAAGAGATTGATAACGGGTAAAACCCCTGCCTCAACCAAAGACAAGGACAAGGATAACAAGAAGAAACCCGTTTCTCGTTCTTCTACAGCCGGTCTTCAGTTCCCCTTACTTTGGAGTCACCCTCTTCAGGGTTTCTACAGGGATAACTGGATCTCAAAACACAGACCCACAGTGGAGAAAAGAGCAAGGATAGTCTGCAAGTGCAAAAATGCCAGATCAGCTTTCTCTTCCTTTCTCACCAGTATTATGCGGAGACAATATCCATCATCCCCACCCACCTCGCTCTCCTCTTACATTGCTCCATTTGAACTCAACGAAAACTCCCCTCTCTTACCATATCTTTCGGTGAATGCCAATGGAAGAGTTGGGGCCACGGCTGCAGTGTATTCCGCTGCTATCCTGGAGTATTTAACTGCAGAGGTGTTGGAGTTGGCTGGCAATGCAAGCAAGGATCTGAAGGTAAAGCGTATTACACCTAGACATTTACAGCTCGCTATCCGAGAAGATGAAGAACTTGACACCCTCATTAAAGGAACAATTGCTGGTGGTGGCGTTATTCCTCATATCCACAAGTCTCTCATCAACAAATCCTCTAAGGAGAAAGTTGCCAAACCTATAAAGGGTCGTTCCATGTTAGTTGAAGGTTCTTCAACAGTACATCCAGCACAACTCTTCTCCCAACTTAAAATCAGAGTGGTGATGCTGGTCTTTAAAGCATCCCCAGCAACCAAAAGATCCTTTGACAAAGAAGCACCAACCCTCCTTGTGGAGTCCTCCTCCCTGGGTAAGGAAAATTTCATGGGTGATGAGATAGTGGTTTTAAGAGATGGGGTGGAAACGGGACCAAGAAAAAATGGTAGGGGATTACAGTTTCCTCTGCCCAGTGTAAACACAGACCATAGACGTCGTGTTCAGAAATTGAAGAGAAAACGTTCGTCCCAATCTTCAAATTTCTTCTTCTTCTCCTTCCCTTTCGTATCAGAGTCTTGGACGATGTCGTTTGGATCCTCTCTCTTATCTCAGCCGCATAGCGTTCGATTCTTGTTCAACAACAACGGAACCTCTCGCTTCAAAGCCGCTGCCCAAGTTCCCGATTTCCTTTCCGAGGATTGGTTCAAATCTCGCAAGAAAAAACCCTTTGGGCCACGATTAGATTTTAGTGCAGAGGATGCGGTGCATAACCAGCTCGAAGCCTTGAAGCACAATGATCAACCTCGTCAAGACTATGGAATCGAGGTTATGTACAGGTTCGCTGGATTTGATCCTTTCGAAAGATCTACCTATTTTGGGCCATTCTTTGATTTGGGCCAGTTTGAAAGGTTTAGGCGTATTTTTCACCATTCTACTTATCGAGTATTGCTAGGTCACAGGGAGAGAAAGATCATGAGCACTTTGTTTGTCGAGGAGAACAAATACAAGCAGCGGGTTTGGATTCGTGGAAGTCGACCGGAGGAAGAGGAGATATTTCAATTTACAATGGTTCAGAGGGTTGGTGGATGCTGGGATGGTTACTGGTTGACGGAATCTCTGCTTCACGACACTGATACATTTTCTGGTGGATTAGCATATTAA 1590 0.4522 MSGKGAKRLITGKTPASTKDKDKDNKKKPVSRSSTAGLQFPLLWSHPLQGFYRDNWISKHRPTVEKRARIVCKCKNARSAFSSFLTSIMRRQYPSSPPTSLSSYIAPFELNENSPLLPYLSVNANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIREDEELDTLIKGTIAGGGVIPHIHKSLINKSSKEKVAKPIKGRSMLVEGSSTVHPAQLFSQLKIRVVMLVFKASPATKRSFDKEAPTLLVESSSLGKENFMGDEIVVLRDGVETGPRKNGRGLQFPLPSVNTDHRRRVQKLKRKRSSQSSNFFFFSFPFVSESWTMSFGSSLLSQPHSVRFLFNNNGTSRFKAAAQVPDFLSEDWFKSRKKKPFGPRLDFSAEDAVHNQLEALKHNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHRERKIMSTLFVEENKYKQRVWIRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLHDTDTFSGGLAY 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00819 529 Pfam Core histone H2A/H2B/H3/H4 123 173 IPR007125 GO:0003677
Spst9g00819 529 SUPERFAMILY Histone-fold 123 183 IPR009072 GO:0046982
Spst9g00819 529 Gene3D Histone, subunit A 108 211 IPR009072 GO:0046982
Spst9g00819 529 FunFam Histone H2A 119 207 - -
Spst9g00819 529 SMART h2a4 98 206 IPR002119 GO:0000786|GO:0003677|GO:0030527
Spst9g00819 529 MobiDBLite consensus disorder prediction 1 34 - -
Spst9g00819 529 Pfam C-terminus of histone H2A 176 207 IPR032454 -
Spst9g00819 529 MobiDBLite consensus disorder prediction 14 30 - -
Spst9g00819 529 PANTHER OS05G0574700 PROTEIN-RELATED 324 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00819 Spst-Chr9 7111879 7117931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00819 - - gsj:114415013 364.77