Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00799 ATGATGAAGCTCTTTCCCCTTGTAATACTTTCAAGCCTATTGCTCAAACAAGTGAGCCTAGTTCTTGCAGACGTTGGTACTGCTGCATCTTATGGACCACCATACATACCAGCTACTGCTTGCGATGGCAATAGGCCAGGTCAATTTCCTTCTGGAAATCTATTTGTGGCTGTGAATGAAGGGTTATGGGATAATGGAGCAGCGTGTGGAAGGAGATACAGAATAAGGTGCCTGAGTGGAAACAATAGACCATGCAAAGGTGGTAGCATCGATGTTAAAGTGGTAGATTCTTGTTCAAGTTCACCTTGTCCCAACACCCTCCTCCTGTCTAACGATGCCTTTGCAGCTATTTCACGCTTCCCTCATGCAAAAATCAATATTGAATATACCCAGTAA 396 0.4394 MMKLFPLVILSSLLLKQVSLVLADVGTAASYGPPYIPATACDGNRPGQFPSGNLFVAVNEGLWDNGAACGRRYRIRCLSGNNRPCKGGSIDVKVVDSCSSSPCPNTLLLSNDAFAAISRFPHAKINIEYTQ 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00799 131 Gene3D - 24 131 IPR036908 -
Spst9g00799 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 4 130 - -
Spst9g00799 131 SUPERFAMILY Barwin-like endoglucanases 15 131 IPR036908 -
Spst9g00799 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 131 IPR007112 -
Spst9g00799 131 CDD DPBB_EG45-like 24 130 - -
Spst9g00799 131 Pfam Lytic transglycolase 57 129 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00799 Spst-Chr9 6894738 6895338 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00799 - - gmx:100792215 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00799 9 6894738 6895338 Spst9g00799 9 6894738 6895338 ECH