Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00771 ATGCTGTTTTATAGAAGAGGAAAGATACATAAAACGCACGCACTGCGCTCGCGGCTTTTCTTAGCCACGTCGCCGCTTCTGCTCTTAACGTGCGCCCCTCCGCCAAATAGAGAGCGAATTCTTGGCTGTGACGACGGCGAATACGATGCAGAGACGAAGTCCTCCGAAGCACAGGCACGATGGGACTTCGCCGCTGCCTCTCGGAATGGATTGGAGCCCTGCGCCTCGAAAATGGTCCTTGTTGTACAGAATGGCCGAGATACAGTGTGGCCACACAATCATCTTACTGGTTGGAGTTATTGTGTCACGATACCTTCTTGGAGCTTTGTTCCAAAAACAAGGAATTCAGATCCTGTAGTGGGACAGTTCTACAGGGTTCAAGTTGGTGTACAGTCACCGGAAGGGATTACAAGGCTCCATGGAGTACTAAGAAGATTCAATGATTTTCTAAAGTTGTTTGCTGATCTTAATAAGGAGTTTCCCAGGAAAAGTATCCCTCCAGCACCGCCCAAGGGACTCTTGCGGTTGAAAAGCAGAGCTTTGTTAGAAGAGAGAAGGAGCTCTTTGGAGGAGTGGATCACCAAATTGTTGTCTGACATTGATATATCAAGATGTGCTGCAGTGGCATCATTTCTTGAACTAGAAGCAGCTGCCAGATTTTCATTCCAAGATGCAACCCAGCAAAATTCTGAAACAGTTCCTGATTCCAATAACACAGTTTGTTCTGTGCAATCACCTCTCCATTCAAGCTTATCATTAGTTGCTGGCAGTTCATCAGTTGCCTCCGATTATGGTAGTGATACTGCATATGAGCCATCCGACCTAGGAACACCAAGAGTTGGACGGGATGATAATTCTGATGTTGGTACAGATGACCTAACCTTAGATGAAGATATTACAAATCCAATAGAAAAGCTTGTGAAATATGGCATATCAAATATTGACGAAGGTTTATTTATGGGTCAGACTATTCTAGAGCAATTGGAAGGCCTTCCTAGGCATAAAGCAAATGCCAGACATGTGAACTATGTTACACAAAAAGACAAAAGTAATGGTAACTTGTATGATTCTTCACTTTTAGTTAATCATAATACCATGGAGCTTTTCTCTGAGCCTGGGCATGCTAAGGTTGTTGGTCATGTTCGTAAGCTTTCAAATGAGAGTGTTGGAAGTGATGGAAGCTCATTACGAGGTAGTGACATCTCTAATTTTGGAATTCCAAATTCATCTGGTGATGGCTCTCACGACCTTCCTGGATCTGCTTTGGTTTCAAGAGAAACAGATAGTATGGGCCACACAAAGTTGAAGTCTACTGGTGATACTCAATTAGTCTTTCCACTAGATCAACGCAATAAATTGAACAGGATTCTTTCAACCATGCAACGAAGGCTAGGCACTGCAAAAACTGATATGGAGGACCTTATTGTTAGATTAAATCAAGAAATAACTGCAAAGGATTTTCTTGCAACTAAGGTCAAGGATTTGGAAGTAGAACTTGAAACTACTAAACAGAAAAATAAGGAGAACTTGCAGCAGGCTATTCTAATTGAGAGGGAAAGATTTACCCAAATGCAGTGGGATATGGAGGAACTTAGACGAAAATCAATGGAAATGGAGATGAAACTAAAGTCAGAATCGGGGCGGAATTCTTATCAGAATTTGACGAAGGAATCAATTGTTCAACAGCAGAATGATGTACTGTTGCAGAATTCAGAAGCTACTAAAGAGCAGCTTGAAATTTTGTCGAAACAGTATGGAGAGCTAGAAGCAAAATCCAAAGCAGATATTAAAGTTCTGGTTAAAGAGGTCAAATCTCTTCGTAATTCCCAGACAAAGTTAAAGAAAGAGCTTAGTGAGACGATAAAGGAAAACAGTGAAACTGAGAAACTACTACTTCACGAAGGAGAGAAGAGGGAGCAGGCAGAAGCTGCTCAGAGAAAACTGCTGGAGAAATGCAGGTTTCTTTTCAACCAGCTTCAAGAGTGCAATGTCAGCCTTCCTTATGAATGTGAAGATAGGGCAATCATGAATTCATCGTCATTAAATGATGCTTTTAATCAATTAACAACATCTGATGACCAAATGGACATCCTACTAGCAGAGGTAGAAAGCTTAGAAAAGGAATATGGAAGTGCGGCTTCCAATGTAGATAAAACCAATGGCATAAAAGATGGTGTAATTTGTGACGATGAAGTGGGAAAGATCATAGCAGACTTGTTCATAGATAATGTTAGATTGAGAAAACAGACAAACCGCGTCACAAGGCACGCTCTGAAATTTGACATGACAGCAAGTGATGATACCCCTTCAATGGAAACTGTATCAAGTACTTAG 2334 0.4147 MLFYRRGKIHKTHALRSRLFLATSPLLLLTCAPPPNRERILGCDDGEYDAETKSSEAQARWDFAAASRNGLEPCASKMVLVVQNGRDTVWPHNHLTGWSYCVTIPSWSFVPKTRNSDPVVGQFYRVQVGVQSPEGITRLHGVLRRFNDFLKLFADLNKEFPRKSIPPAPPKGLLRLKSRALLEERRSSLEEWITKLLSDIDISRCAAVASFLELEAAARFSFQDATQQNSETVPDSNNTVCSVQSPLHSSLSLVAGSSSVASDYGSDTAYEPSDLGTPRVGRDDNSDVGTDDLTLDEDITNPIEKLVKYGISNIDEGLFMGQTILEQLEGLPRHKANARHVNYVTQKDKSNGNLYDSSLLVNHNTMELFSEPGHAKVVGHVRKLSNESVGSDGSSLRGSDISNFGIPNSSGDGSHDLPGSALVSRETDSMGHTKLKSTGDTQLVFPLDQRNKLNRILSTMQRRLGTAKTDMEDLIVRLNQEITAKDFLATKVKDLEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSMEMEMKLKSESGRNSYQNLTKESIVQQQNDVLLQNSEATKEQLEILSKQYGELEAKSKADIKVLVKEVKSLRNSQTKLKKELSETIKENSETEKLLLHEGEKREQAEAAQRKLLEKCRFLFNQLQECNVSLPYECEDRAIMNSSSLNDAFNQLTTSDDQMDILLAEVESLEKEYGSAASNVDKTNGIKDGVICDDEVGKIIADLFIDNVRLRKQTNRVTRHALKFDMTASDDTPSMETVSST 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00771 777 Coils Coil 528 548 - -
Spst9g00771 777 ProSiteProfiles PX domain profile. 102 219 IPR001683 GO:0035091
Spst9g00771 777 MobiDBLite consensus disorder prediction 265 293 - -
Spst9g00771 777 Coils Coil 564 591 - -
Spst9g00771 777 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 84 773 IPR044588 GO:0015031
Spst9g00771 777 Coils Coil 596 623 - -
Spst9g00771 777 SMART PX_2 108 215 IPR001683 GO:0035091
Spst9g00771 777 Coils Coil 688 715 - -
Spst9g00771 777 Pfam PX domain 142 213 IPR001683 GO:0035091
Spst9g00771 777 Coils Coil 485 512 - -
Spst9g00771 777 FunFam Phox (PX) domain-containing protein 99 237 - -
Spst9g00771 777 Gene3D - 112 240 IPR036871 GO:0035091
Spst9g00771 777 SUPERFAMILY PX domain 96 215 IPR036871 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00771 Spst-Chr9 6619468 6627933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00771 - - gmx:100792151 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00771 9 6619468 6627933 Spst9g00771 9 6619468 6627933 ECH