Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00767 ATGAAGCAAGCTTCATCTGAGGCAGTTCCTTCGCTATCTTCCACGCCATCGTTCACGGAGGCGGCGACATCGACGTCATCGTCCGCGGCCGCGGCGGAGGACCTGGCTGTGGGGTCGCGGGACGGTGGCGGCGGCGCTCAAGAGACGGTAGCGGTGGATCGGCGAGGCGAGTACTCCGCGGTGTGCCGATGGACGGTGCACAATTTCCCGAGAATAAAGGCTAGGGCACTGTGGAGCAAATACTTCGAGGTAGGCGGTTACGATTGTCGGTTGCTAATATACCCCAAGGGTGACTCACAGGCGCTTCCAGGTTACATCTCCATCTATCTCCAAATCATGGACCCTCGCGGCACCTCGTCTTCCAAATGGGACTGTTTCGCGAGTTATCGTTTGGCAATCGTGAACGTTGCCGACGATTCCAAAACCATTCACCGCGATTCCTGGCATCGATTCTCCAGTAAGAAGAAATCGCACGGTTGGTGCGATTTCACGCCCTCTTCTACTGTTTTCGACCCGAAATTGGGATACCTCTCCAATTCCGATTCCGTTTTGATCACTGCGGATATTCTCATTCTTCACGAGTCCGTTAATTTCACACGAGACAACAATGAGTTGCAGTCCTCGTCTTCGTCCTCATCCTCGACAATGAGTTCCTCCGTTGTTGCGAGTCCCGCGTCTGATGTGTTGAGTGGTAAGTTCACTTGGAAAGTGCATAATTTCAGCCTGTTCAAGGAGATGATCAAGACGCAGAAGATAATGAGTCCGGTGTTCCCTGCGGGAGAGTGCAATTTGAGGATTAGTGTGTACCAGAGCTCTGTGAATGGGGTTGAGTATTTGTCTATGTGTTTGGAGAGCAAGGATACGGATAAGTCTGTGGTGTTGTCTGATAGGAGTTGTTGGTGTTTGTTTAGGATGTCTGTGTTGAATCAGAAGCCTGGTTCTAATCACATGCATAGGGATTCCTATGGCCGGTTTGCGGCTGATAATAAGAGCGGTGACAATACCAGCTTGGGATGGAATGATTACATGAAGATGTCGGATTTTATTGGTGTGGATTCGGGGTTCTTGGTGGATGACACTGCGGTTTTTAGCACCTCATTTCATGTGATCAAGGAGTTTAGCAGCTTCTCCAAGAATGGTTCTGTGATTGCCGGGAGAAGTGGTAGTGGTGCTAGGAAGTCTGATGGGCATATTGGAAAGTTCACTTGGAGGATTGAGAATTTTACTAGGCTGAAGGATTTGCTTAAGAAGAGGAAAATCACGGGTCTGTGCATCAAGAGCAGGAGGTTTCAGATTGGTAATAGGGATTGTCGACTTATTGTTTACCCTCGAGGGCAGTCTCAGCCACCATGCCACCTTTCAGTTTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGCTTTGTTAGTCATCGTTTGTCAGTAGTGAACCAGAAGATGGAGGATAAATCCGTCACCAAGGAATCTCAGAACCGCTACTCAAAAGCTGCAAAGGATTGGGGTTGGCGTGAATTTGTGACACTTACCAGTCTCTTTGATCAAGATTCTGGTTTTCTTGTCCAGGACACTGTCATATTCTCTGCCGAAGTTCTTATATTGAAGGAGACATCAATAATGCAGGATTTTACTGAGCACGAATCTGAGTTAAGCAGCAGCTCTCCTCTTGATAATTCTGGAAAAAGAAGTTCATTTACGTGGAAAGTGGAGAATTTCCTGTCTTTCAAGGAAATAATGGAGACAAGAAAAATCTTCAGTAAATTCTTTCAGGCTGGTGGATGTGAACTTCGAATTGGTGTATACGAGTCATTTGACACCATATGCATTTATTTAGAGAGTGACCAGGCTGTTGGTAGTGATCCAGATAAAAATTTCTGGGTCAGATACAGAATGGCTGTTGTGAATCAAAAGAACCCATCTAAGACAGTGTGGAAAGAATCTTCTATCTGCACAAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATGTTAGAAGCGGATGCAGGATTTCTTGTACGTGACACTGTTGTTTTTGTGTGTGAAATATTGGATTGCTGTCCTTGGTTTGAGTTTTCTGATTTAGAGGTTTTAGCATCAGAGGATGATCAGGATGCGTTGACAACTGACCCTGATGAGCTTATTGACTCTGAAGACAGTGAAGGGATAAGTGGAGACGAGGAAGATATTTTCAGAAATCTTCTTTCCAGAGCTGGATTCCATTTAACATATGGAGATAATCCTTCTCAGCCACAGGTTACTCTAAGGGAGAAACTTCTTATGGATGCTGGTGCAATTGCAGGGTTTCTGACTGGTCTTCGAGTATATCTTGATGATCCTGCCAAAGTTAAGCGCCTGCTTCTGCCTACCAAGCTCTCTGGTAGTTGTGATGGGAAGAAGGCCACCAAAGCTGATGAATCTTCCCCAAGTTTGATGAATTTGCTGATGGGAGTTAAAGTCTTGCAGCAAGCAATCATAGATTTACTATTAGATATTATGGTTGAATGTTGCCAACCTTCTGAAGTAGGTGCTGTTACTGATTCTGTTGATGCATGCTCTAAACCTTCTCCAGAGGGAAGTGGAGCTGCCAGTCCTCTTGAGTGTGAAAGAGAAAGTGGAGCAATGGATTCTACGCGAGTTCCCGTTAATGAGAGATTGGATTCTGTTGTGGAAGAGAGCAGTAATACATCTGCTGTGCAGAGCTCTGATTCAAAAGGGAATGGTATTCAGGAAAAAGCTGGTACTGGACAGCCCATTTGTCCACCAGAGACATCTGCCACTGCTTCAGAAAATGCATCCTTTCGGTCAAAGACCAAGTGGCCAGAACAGTCTGAGGAGCTCTTAGGTTTGATTGTAAACTCCCTAAGAGCTTTGGATGGTGCTGTTCCTCAAGGCTGTCCAGAACCAAGACGCCGACCTCAATCTGCACAAAAAATTACTCTTGTATTGGACAAGGCTCCTAAGCATTTGCAAGCTGACCTAGTTGCTCTGGTACCTAAATTGGTTGAGCAGTCAGAACACCCACTTGCTGCCTATGCACTTCTTGACCGACTTCAAAAGCCAGATGCAGAACCTGCTTTAAGAATACCTGTTTTTGGGGCTCTTAGTCAATTGGATTGTGGTAGTGAAGTGTGGGAACGCATTCTATTTCAGTCATTTGAGCTTTTGACAGACTCAAATGATGAACCCCTTGCTACAACAATAGATTTTATATTCAAAGCGGCATCTCAGTGTCAACACCTCCCTGAAGCAGTTAGGTCTGTTCGTGTTAGACTGAAAAATCTAGGTCTTGAGGTGTCACCTTGCGTCCTTGACTTTTTGAGTAAGACTATAAATAGTTGGGGCGATGTTGCGGAAACCATACTTAGGGACATTGATTGTGATGATGACTATGGTGACAATTGCTCAGCTCTGCCATGTGGGATTTTCTTATTTGGTGAACATGGAACTTCTCCCAGTGGGCTGCATGTGATTGATGAGCATGCTTATCATGCTAGTCGTCATTTTTCTGATATTTATATACTGTTTGAGATGCTATCTATTCCTTGCCTTGTTGCTGAAGCTTCTCAAACATTTGAGAGAGCTGTTGCTCGAGGTGCAATAAGTGCTCAGTCCGTAGCCCTGGTATTGCAAAGCCGTCTTTCCCAAAGATTGACCAATAATGGAAGATATGTTTCTGAAAATTTTCAACATTCAGATGGTGCTACAGAGGGAGATGCCTGTGAGCAACTGGGAGTTCAGAGGGATGATTATGCTTCTGTTCTAGGCCTTGCTGAGAATTTGGCTCTCTCTAGAGATCCATGCGTGAAAGAATTTGTTAAACTGCTCTATATGATAATGTTTAGATGGTTTGCCAATGAATCTTATCGGGGGAGGATGTTGAAGAGGCTTGTTGATCGTGCCACTAGCAATACTGACAATAGTCGTGAAGTAGATTTTGATTTGGATATCTTGGTTACTTTGGTCTGTGAGGAGCAGGAGTTTATCAGGCCTGTTTTGAGCATGATGCGCGAAGTTGCTGAACTTGCAAATGTTGATCGGGCTGCACTATGGCACCAGTTGTGCGCCAGTGAGGATGAAATTATTCGCATGCGTAAAGAAAGCAAAACTGAGATTTCTATTATGGCTAAGGAAAAAGGTGTTATATCGCAAAAGCTGAGTGAATCTGAAATTGCGAACAACCGATTGAAGTCTGAAATGAGGGCTGAGATGGATCGGTTTTCACGAGAAAAGAAGGAACTAGTTGAACAAGCTCAAGAAATTGAGAGTCAGCTTGAATGGCTCCGCTCAGAACGGGATGATGAAATTGCCAAGCTCTCTGCAGAGAAGAAAGCTCTTCATGACCGTTTACATGATGCAGAGACACAACTTTCTCAATTGAAATCTCGGAAACGTGATGAATTAAAGAAAATAGTCAAGGAGAAAAATGCTCTAGCTGAAAGGTTGAAAAATGCTGAAGCTGCTCGCAAGAGATTTGATGAAGAACTGAAAAGATTTGCAACAGAGAATGTGACTCGGGAGGAAATTCGGCAATCACTTGAAGATGAAGTCCGGAGATTGACTCAAACTGTTGGACAAACGGAAGGGGAAAAGAGGGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAGTTGCAAGCTTGCCAGCAATATATTCACACACTTGAGGCCTCACTCCAGGAGGAAATGTCAAGACATGCCCCTCTATATGGTGCTGGTCTGGAGGCTTTGTCATTGAAAGAGTTGGAAACACTATCACGTATTCATGAAGATGGGCTTAGGCAGATCCATGCCATTCAACAGCGTAAGGGGAGTCCTGCTGGGAGCCCTCTTGTGAGCCCCCATGCTCTCCCTCACACCCATGGATTGTATCCAGCTGCCTCGCCACCAATGGCTGTGGGACTGCCTCCCTCAATCATCCCAAATGGTGTAGGGATCCACAGCAACGGCCATGTAAATGGTGCAGTTGGACCCTGGTTTAACCACTCTTGA 5031 0.4498 MKQASSEAVPSLSSTPSFTEAATSTSSSAAAAEDLAVGSRDGGGGAQETVAVDRRGEYSAVCRWTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLSNSDSVLITADILILHESVNFTRDNNELQSSSSSSSSTMSSSVVASPASDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKSVVLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGVDSGFLVDDTAVFSTSFHVIKEFSSFSKNGSVIAGRSGSGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHESELSSSSPLDNSGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPSKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGSCDGKKATKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEVGAVTDSVDACSKPSPEGSGAASPLECERESGAMDSTRVPVNERLDSVVEESSNTSAVQSSDSKGNGIQEKAGTGQPICPPETSATASENASFRSKTKWPEQSEELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKITLVLDKAPKHLQADLVALVPKLVEQSEHPLAAYALLDRLQKPDAEPALRIPVFGALSQLDCGSEVWERILFQSFELLTDSNDEPLATTIDFIFKAASQCQHLPEAVRSVRVRLKNLGLEVSPCVLDFLSKTINSWGDVAETILRDIDCDDDYGDNCSALPCGIFLFGEHGTSPSGLHVIDEHAYHASRHFSDIYILFEMLSIPCLVAEASQTFERAVARGAISAQSVALVLQSRLSQRLTNNGRYVSENFQHSDGATEGDACEQLGVQRDDYASVLGLAENLALSRDPCVKEFVKLLYMIMFRWFANESYRGRMLKRLVDRATSNTDNSREVDFDLDILVTLVCEEQEFIRPVLSMMREVAELANVDRAALWHQLCASEDEIIRMRKESKTEISIMAKEKGVISQKLSESEIANNRLKSEMRAEMDRFSREKKELVEQAQEIESQLEWLRSERDDEIAKLSAEKKALHDRLHDAETQLSQLKSRKRDELKKIVKEKNALAERLKNAEAARKRFDEELKRFATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSLKELETLSRIHEDGLRQIHAIQQRKGSPAGSPLVSPHALPHTHGLYPAASPPMAVGLPPSIIPNGVGIHSNGHVNGAVGPWFNHS 1676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00767 1676 SUPERFAMILY TRAF domain-like 566 690 - -
Spst9g00767 1676 Coils Coil 1516 1543 - -
Spst9g00767 1676 SUPERFAMILY TRAF domain-like 228 373 - -
Spst9g00767 1676 MobiDBLite consensus disorder prediction 853 945 - -
Spst9g00767 1676 SUPERFAMILY TRAF domain-like 399 540 - -
Spst9g00767 1676 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 390 543 IPR008974 GO:0005515
Spst9g00767 1676 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 553 691 IPR008974 GO:0005515
Spst9g00767 1676 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 45 195 IPR008974 GO:0005515
Spst9g00767 1676 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 222 373 IPR008974 GO:0005515
Spst9g00767 1676 ProSiteProfiles MATH/TRAF domain profile. 59 189 IPR002083 GO:0005515
Spst9g00767 1676 Pfam MATH domain 68 190 IPR002083 GO:0005515
Spst9g00767 1676 Pfam MATH domain 578 685 IPR002083 GO:0005515
Spst9g00767 1676 Pfam MATH domain 430 536 IPR002083 GO:0005515
Spst9g00767 1676 CDD MATH 231 363 IPR002083 GO:0005515
Spst9g00767 1676 MobiDBLite consensus disorder prediction 1 29 - -
Spst9g00767 1676 CDD MATH 399 534 IPR002083 GO:0005515
Spst9g00767 1676 Gene3D - 1433 1626 - -
Spst9g00767 1676 SUPERFAMILY TRAF domain-like 58 197 - -
Spst9g00767 1676 Coils Coil 1399 1508 - -
Spst9g00767 1676 CDD MATH 63 189 IPR002083 GO:0005515
Spst9g00767 1676 ProSiteProfiles MATH/TRAF domain profile. 398 534 IPR002083 GO:0005515
Spst9g00767 1676 ProSiteProfiles MATH/TRAF domain profile. 565 689 IPR002083 GO:0005515
Spst9g00767 1676 SMART math_3 570 670 IPR002083 GO:0005515
Spst9g00767 1676 SMART math_3 235 348 IPR002083 GO:0005515
Spst9g00767 1676 SMART math_3 403 515 IPR002083 GO:0005515
Spst9g00767 1676 SMART math_3 61 169 IPR002083 GO:0005515
Spst9g00767 1676 CDD MATH 567 689 IPR002083 GO:0005515
Spst9g00767 1676 MobiDBLite consensus disorder prediction 894 917 - -
Spst9g00767 1676 MobiDBLite consensus disorder prediction 926 944 - -
Spst9g00767 1676 ProSiteProfiles MATH/TRAF domain profile. 230 367 IPR002083 GO:0005515
Spst9g00767 1676 PANTHER TRAF-LIKE FAMILY PROTEIN 25 1676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00767 Spst-Chr9 6570214 6578594 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00767 - - gmx:100788511 3092.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00767 9 6570214 6578594 Spst9g00767 9 6570214 6578594 ECH