Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00766 ATGGGATTCTTCACCGGCATGATCCTTGGTATCGGCATTGGTATCGTATTGATAGTCGCTTTCGCTCGTCACGAGAACGTTCGATCCAAGCATCGCTCCGATTTGGCGAAGACGATAGCAGAGTTTGCGAGGATGACGGTGGAAGATTCCAGAAAACTTTTGCCTCCTAAGTTCTATCCATCATGGTTAAATTGGCTTAATACCCAACTCAGGAGGATTTGGCCACACGTTGATGAGGCAGCGTCAGAGTTGATAAGAACCATTGTGGAACCAATTCTTGAACAATATAGGCCGATTATTTTGTCTTCTCTCACATTCTCCAAGTTGACCCTTGGCACTGTGGCTCCACAATTTACAGGAGTTACAATCGTTGAAGAGCACAGTGGGCTTGATGGGGTGACTATGGATCTTGAGATGCAATGGGATGGTAACCCGAATATCGTTCTTGACATTAAAACCCGAGTTGGTGTTGGACTTCCTGTACAGGTAAAAGATATTGGATTCACTGGGGTTTTCAGGTTGATCTTCAAACCACTAGTGAATGATTTCCCTGGTTTCGGAGCTAAAGATCTGGATTTTACTCTGAAGGTTATTGGGGGTGATTTATCAGCTTTACCGGGGATATCTGATGCTATAGAGGAAACAATTAAAGATGCGATTGAAGACTCTATAACTTGGCCTGTACGCCAAATTATACCAATTTTACCGGGGGATTACAGTAATCTAGAGTTGAAACCGGTTGGAATACTAGAAGTAAAACTGGTGCAAGCAAAGAACTTAACAAATAAAGATTTGATTGGGAAATCCGATCCTTATGCTATCCTATTTGTACGCCCGCTTCGTGACAGAACCAAAACCAGTAAAGTAATGAACAACCAGTTGAATCCAATATGGAATGAGCACTTTGAATTCACTATTGAAGATGAGTCATCGCAGCATTTGACCATAAGAATTTTCGATGATGAAGGCATTCAGGCTTCCGAACTTATTGGCTGTGCCCAGTTTTCGCTGAAGGACCTCGAACCTGGTAAAGTCAAGGATGTATGGCTTAAGCTGGTTAAGGATTTGGAGGTCCATAGAGACAACAAGTACAGGGGTGAGGTGCACTTGGAGCTCTTGTATTGCCCATTTGGAGTCGAATGCGCCATTAAGAACCCTTTTGACCCTGATTTCTCACTAACCTCGTTCGAGAAGACCCTCAAGACCGGTGAGGGAGAGAGTGAGGATCCTACAGGTTCACGTAAGAGAAGCAACGTCATTGTAAGAGGGGTTCTATCTGTGACAGTGATTTCAGCTGAAGACTTGCCAGTAGTAGACCTAATGGGCAAGGCTGATCCTTTTGTTGTCCTTAGTTTGAAAAAAACAGAAAAAAAACTCAAGACCCGAGTTGTAAATGAATCCCTAAACCCAGTTTGGAATCAAACATTTGATTTTGTTGTTGAGGATGGCCTGCACGAAATGTTAATTCTTGAAGTCTACGATCATGATACGTTTGGCAAGGAAAAAATTGGAAGAGTGATCATGACACTGACTAAGGTCATCTTGGAAGGAGAATACAATGAAACTTATCCTATTGATGGAGCTAAATCCGGAAACATTTCTTTGTATTTGAAGTGGACTCCGCAGCACAAATTCAGGGATACTTAG 1647 0.4262 MGFFTGMILGIGIGIVLIVAFARHENVRSKHRSDLAKTIAEFARMTVEDSRKLLPPKFYPSWLNWLNTQLRRIWPHVDEAASELIRTIVEPILEQYRPIILSSLTFSKLTLGTVAPQFTGVTIVEEHSGLDGVTMDLEMQWDGNPNIVLDIKTRVGVGLPVQVKDIGFTGVFRLIFKPLVNDFPGFGAKDLDFTLKVIGGDLSALPGISDAIEETIKDAIEDSITWPVRQIIPILPGDYSNLELKPVGILEVKLVQAKNLTNKDLIGKSDPYAILFVRPLRDRTKTSKVMNNQLNPIWNEHFEFTIEDESSQHLTIRIFDDEGIQASELIGCAQFSLKDLEPGKVKDVWLKLVKDLEVHRDNKYRGEVHLELLYCPFGVECAIKNPFDPDFSLTSFEKTLKTGEGESEDPTGSRKRSNVIVRGVLSVTVISAEDLPVVDLMGKADPFVVLSLKKTEKKLKTRVVNESLNPVWNQTFDFVVEDGLHEMLILEVYDHDTFGKEKIGRVIMTLTKVILEGEYNETYPIDGAKSGNISLYLKWTPQHKFRDT 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00766 548 Gene3D C2 domain 240 376 IPR035892 -
Spst9g00766 548 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 246 377 IPR035892 -
Spst9g00766 548 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 64 233 IPR039010 -
Spst9g00766 548 CDD C2 250 352 - -
Spst9g00766 548 ProSiteProfiles C2 domain profile. 406 523 IPR000008 -
Spst9g00766 548 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 539 IPR045050 GO:0008289
Spst9g00766 548 CDD C2 425 525 - -
Spst9g00766 548 CDD SMP_SYT 60 234 - -
Spst9g00766 548 Gene3D C2 domain 420 547 IPR035892 -
Spst9g00766 548 ProSiteProfiles C2 domain profile. 227 350 IPR000008 -
Spst9g00766 548 FunFam Extended synaptotagmin-2 406 543 - -
Spst9g00766 548 PRINTS C2 domain signature 488 496 IPR000008 -
Spst9g00766 548 PRINTS C2 domain signature 466 479 IPR000008 -
Spst9g00766 548 PRINTS C2 domain signature 440 452 IPR000008 -
Spst9g00766 548 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 59 235 IPR031468 GO:0008289
Spst9g00766 548 FunFam Plant synaptotagmin 243 385 - -
Spst9g00766 548 SMART C2_3c 424 522 IPR000008 -
Spst9g00766 548 SMART C2_3c 249 349 IPR000008 -
Spst9g00766 548 Pfam C2 domain 248 352 IPR000008 -
Spst9g00766 548 Pfam C2 domain 423 525 IPR000008 -
Spst9g00766 548 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 419 542 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00766 Spst-Chr9 6558982 6567336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00766 244 489 Lipid Metabolism Gene Families AT3G61300 27.490 5.37e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00766 - - gmx:100787972 945.651