Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00762 ATGGAAGGTTGCCTCAAGCTGGAGCTGAAGAAATATGACATCCGATTATTGGAGAATTTTCTTATGACAAATTGGGAGAGGCTTTTGCAATTGCAACTTGTAAGGGCCAAAAGAAAAGCTGCAAAAATGGGTTCCGTTTCTCTTCTAAAGTGCTACAGGCCCTTCTTCTCTACGCTTTTTCCTAGCTCCGCTCCACCCAGACCCCACGCCGCCATCTTCAGGACGAAGAAACCGCCGTCCTTCTGCGCAGCCTCATCTCCGCCGTTGACAGCGGAGAAGGATTGCAGAAAATCCGACGCCGCCGGTCTCACCTTGACGAATTCCGCGCCGGAGGTGTGGCTGCACAACACCATGTCTAAAACGAAGCAACTCTTCGAGCCCAAAGTGAAATCCAAAGTGGGAATGTACGTTTGCGGCGTCACCGCCTACGATCTCAGCCATATTGGACATGCACGCGTCTATATCAATTTCGACCTTCTTTACAGGTTTCTCTCTTCTCTTCGCACACGTTTAAGTCATTCATACCCTCTATTTCGATTTGGTACTAATTGGCTTTCTCCGCTTGGCAATTGGGCAGATACTTCAAGCATTTGGGATTTGAAAGCAAAAGAGTTAGGAGAAGATCCAATCAGTTTGAGCAAGCGCTATTGTGAAGAGTTCTGTCGAGACATGGTAACTCTTAATTGCCTGCCTCCCTCTGTGGAACCAAAGGTCTCGGAGCATATGCCCCAAATCATTGATATGATTGAGAAGATTCTTAATAATGGGTATGCCTACATTGTTGATGGGGATGTATACTTTAATGTAGAAAAATTTCCAGAATATGGGAAACTATCTAGTCGAGATCTAGAAGATAATCGAGCTGGTGAGAGGGTTGCAGTTGATTCAAGGAAGAAAAATCCTGCTGATTTTGCTCTGTGGAAGTCTGCAAAGCCAGGGGAGCCATTTTGGGAGAGTCCCTGGGGTTCTGGAAGACCTGGGTGGCATATTGAATGCAGTGCCATGAGCGCTGCTTATCTTGGGTACTCTTTTGACATCCACGGTGGAGGAATTGACCTTGTGTTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCATGTAAGAAAAGTGATATAAGCGTATGGATGCACAATGGTTTTGTCACCGTTGATTCTGTGAAGATGTCAAAATCTTTGGGAAATTTTTTCACAATACGTCAGGTTATAGACATTTACCATCCACTGGCCTTGAGATATTTTTTGATGAGTGCCCATTATCGATCTCCTGTTAACTACTCAAATGTACAGCTTGAAAGTGCTTCAGATCGTATTTTTTATATATATGAGGTATTACTTTCTTCAGGAATTACCTTATTTCTCCGTGCTTTGTGTTGTCTGTCTACGTTACACGAATGTGAAAGCTTTTTGAATCAGCATGATCAGACAATTTTGAAGGATTCCATTCCACCAGATACTTCGAATATTATTGATAAGTTCCATGGTGTTTTTTTGACCTCAATGTCGGATGATCTTCACACTCCAGTCGTATTGGCTGGCATGTCCGATCCCTTAAAATCAATCAATGATTTGCTGCATACCCGTAAGGGGAAAAAACAACAATTTCGATTAGAATCACTTGCAGCTTTAGAGAAGAGCATCAGGGATGTCCTTCCTGTTTTAGGACTAATGCCTGCAAGTTACTCTGAGGTTTTGCTGCAGCTGAAGGAAAAAGCTTTGAAGCGCGCAAACTTGACAGAAGACCAAGTCTTGCAGAAGATTGAAGAACGGGCTGCTGCTCGAATAGAAAGGGAGTATGCTAAATCGGATGCAATTAGGAATGATTTGGCTGTTCTTGGTATTACTCTTATGGACGGTCCAAATGGTACAACTTGGAGGCCTACCATTCCTCTTCCACTTCAGGAACTGCTCTAG 1917 0.4366 MEGCLKLELKKYDIRLLENFLMTNWERLLQLQLVRAKRKAAKMGSVSLLKCYRPFFSTLFPSSAPPRPHAAIFRTKKPPSFCAASSPPLTAEKDCRKSDAAGLTLTNSAPEVWLHNTMSKTKQLFEPKVKSKVGMYVCGVTAYDLSHIGHARVYINFDLLYRFLSSLRTRLSHSYPLFRFGTNWLSPLGNWADTSSIWDLKAKELGEDPISLSKRYCEEFCRDMVTLNCLPPSVEPKVSEHMPQIIDMIEKILNNGYAYIVDGDVYFNVEKFPEYGKLSSRDLEDNRAGERVAVDSRKKNPADFALWKSAKPGEPFWESPWGSGRPGWHIECSAMSAAYLGYSFDIHGGGIDLVFPHHENEIAQSCAACKKSDISVWMHNGFVTVDSVKMSKSLGNFFTIRQVIDIYHPLALRYFLMSAHYRSPVNYSNVQLESASDRIFYIYEVLLSSGITLFLRALCCLSTLHECESFLNQHDQTILKDSIPPDTSNIIDKFHGVFLTSMSDDLHTPVVLAGMSDPLKSINDLLHTRKGKKQQFRLESLAALEKSIRDVLPVLGLMPASYSEVLLQLKEKALKRANLTEDQVLQKIEERAAARIEREYAKSDAIRNDLAVLGITLMDGPNGTTWRPTIPLPLQELL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00762 638 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 478 628 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Spst9g00762 638 Gene3D HUPs 111 428 IPR014729 -
Spst9g00762 638 FunFam Cysteine--tRNA ligase 111 426 - -
Spst9g00762 638 CDD CysRS_core 113 428 IPR032678 -
Spst9g00762 638 FunFam Cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 456 628 - -
Spst9g00762 638 PANTHER CYSTEINYL-TRNA SYNTHETASE 109 632 IPR024909 -
Spst9g00762 638 Hamap Cysteine--tRNA ligase [cysS]. 112 629 IPR015803 GO:0004817|GO:0005524|GO:0006423
Spst9g00762 638 Gene3D - 459 628 - -
Spst9g00762 638 NCBIfam cysteine--tRNA ligase 114 627 IPR015803 GO:0004817|GO:0005524|GO:0006423
Spst9g00762 638 SUPERFAMILY Nucleotidylyl transferase 112 435 - -
Spst9g00762 638 PRINTS Cysteinyl-tRNA synthetase signature 135 146 IPR024909 -
Spst9g00762 638 PRINTS Cysteinyl-tRNA synthetase signature 314 332 IPR024909 -
Spst9g00762 638 PRINTS Cysteinyl-tRNA synthetase signature 345 366 IPR024909 -
Spst9g00762 638 Pfam tRNA synthetases class I (C) catalytic domain 126 435 IPR032678 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00762 Spst-Chr9 6531321 6538644 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00762 K01883 - gmx:100786700 978.393