Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00759 ATGGGAAAGCCCACAGGGAAGAAGAAGGATATCGCTAATCCGGGTGCTGCAAATTCACACGCCAAACCTGCGAAGTCTTCCAAAGCTTTCGATGAAGATACGGCAATGTTCATCAACATGTCACAAGAGTTCAGGGAAGAAGGTAACAAGTTGTTTCAGAAGAAGGACCACGAAGGCGCCATGCTCAAGTACGAGAAGGCACTGAAGCTGCTTCCGAAGAACCACATTGATGTCGCACATCTTCATACCAACAAGGCCACGTGTTACATGCAATTGGGTCTCGGGGAATACCCTCGAGCCATTCACGAATGCAATTTGGCGCTGGAAGTGTCTCCACGGTACAGCAAAGCTCTTCTGAAAAGAGCCACGTGTTATCGTGCGCTCAATCGCTTCGATTTGGCACTCAGGGATGTCAATCTTGTTTTGAGCGTGGAGCCGAATAATCTCGCGGCGTTGGAGTTTCTTGAGAGTCTTACAAAGTCAACGGAAGAAAAGGGGGTTTCTGTTGATGATAAAGGGGTGGCTTTTGATACTACCATTTATCGCACTCCTTCTCCTTCTGCGCAAAAACTGAACAAAAAGAGAGGTAAAAAAATTGAGGACAAGATGGTTGTGAAGGAAAAAGTGGGTGTTATTGTAGAGGATAAAAAGGTGGTTTCAAAAACAATTGGGCAAGAAAGAAAGGTGGTTTCAAAAACAATTGAGCAAGGAAAAAATGTGGTTTCAAAAGCAATTGAGCAAGAAGAAAAGGTGGTTTCAAAAGCAATTGAGCAAGAAGAAAAGGCGGTTTCAAAAGTAATTGAGCAAGAAGAAAAGGTGGTGGAAGTCGAATCTGTGGAGGAAGAAACACCCGTCACGATCACAAGGAGCGTGAAGTTGGTATTTGGAGAAGATATAAGGCGGGCTCAGTTACCCGTGAATTGTAGTGCGAAGTTGGTGAGGGATATAGCTAAGGATCGGTTTCCTGGTTTGAAGGGGGTTCTTGTCAAGTATAAGGATAAAGAAGGTGATTTGGTTACGATCACTACTACAGATGAACTAAGGTTAGCTGAAAAGTCTGTTCCTGAAAAGGCATCGTTTAGGCTTTATATTACTGAGGTCAGTCCAGATCAAGAACCTGCTTATGATGGAACAACAACTAATGGGGATGAGGTGCAAAGGGACGGTGGAAAACTAAATGATGATTTTGAGAATGGGGGTATGGAAGAAGGCAGAGATGAAGATGCTGCAAGAAAGATGATTACTGTGGAGGACTGGCTTCTCCAGTTTGCAAGGCTGTTCAAGAACCATGTAGGGTTTGAGTCTGATTCTTATCTAGATACTCATGAGTTCGCGATGAAGCTGTATGGAGAAGCGATCGAGGATACGGTAGCAAGCAATGATGCTCAAGAACTTTTTGGAATTGCTGCTGATAAATTTCAAGAGATGGCTGCCTTGGCATTGCTTAATTGGGGAAGTGTTCAAATGTCCAGGGCAAGGAACCAGGGTTTCTTTTCCGAGGATGGGGCCACAGAATCTTCCTTGGAGCATATAAAAGCTGCATATGAGTTGGCACGAACGGAGTACAAGAAAGCAGAAATGAGATATGAAGAAGCCTTGAAAATCAAACCTGACTTCTATGAAGGATATCTTGCTCTTGGGCATCAGCAATTTGAGCAAGCAAGGCTGTGCTGGTGTTATGCATTAGCATGCAAGGAATCAGATGCTGGCTTTTCTGATGAGGTTCTACAACTTTATAACAAGGCAGAGGATAGCATGGAGAAAGGCATATTGATGTGGGAGGAGATGGAGGAGCAGCGTCTGAATGGAATATCCCAATCAGATAAATATAAAGAACAGTTAGAGAAAATGGGCTTGGATGGTCTTTTCAAAGATGTTTCTGATGATGAAGCTTCAAAGCAAGCTAGAAAGATGAGATCTCAGATACACCTTTTATGGGGAACCTTGTTGTATGAACGTTCTGTGGTGGAATATAAGCTTGGCCTTCCCACATGGGAGGAATGTTTGGAGGTTGCAGTTGAAAAGTTTGAACTAGCTGGAACTTCTGCAACAGATATTGCTTTTATTGTAAAGAATCACTGCTCAAATGAAACAGCACTTGAAGGGTTCAAAATTGATGAGATAGTACAGGCATGGAATGAGATGTATGATGCTCAGGGGTGGCAGTTTGGTGATCCATCATTTCGACTTGAACCATTGTTTCGTCGGCGTGTTCCTAAACTCCATTCCATCTTGGAGCAGTTTTAA 2247 0.4335 MGKPTGKKKDIANPGAANSHAKPAKSSKAFDEDTAMFINMSQEFREEGNKLFQKKDHEGAMLKYEKALKLLPKNHIDVAHLHTNKATCYMQLGLGEYPRAIHECNLALEVSPRYSKALLKRATCYRALNRFDLALRDVNLVLSVEPNNLAALEFLESLTKSTEEKGVSVDDKGVAFDTTIYRTPSPSAQKLNKKRGKKIEDKMVVKEKVGVIVEDKKVVSKTIGQERKVVSKTIEQGKNVVSKAIEQEEKVVSKAIEQEEKAVSKVIEQEEKVVEVESVEEETPVTITRSVKLVFGEDIRRAQLPVNCSAKLVRDIAKDRFPGLKGVLVKYKDKEGDLVTITTTDELRLAEKSVPEKASFRLYITEVSPDQEPAYDGTTTNGDEVQRDGGKLNDDFENGGMEEGRDEDAARKMITVEDWLLQFARLFKNHVGFESDSYLDTHEFAMKLYGEAIEDTVASNDAQELFGIAADKFQEMAALALLNWGSVQMSRARNQGFFSEDGATESSLEHIKAAYELARTEYKKAEMRYEEALKIKPDFYEGYLALGHQQFEQARLCWCYALACKESDAGFSDEVLQLYNKAEDSMEKGILMWEEMEEQRLNGISQSDKYKEQLEKMGLDGLFKDVSDDEASKQARKMRSQIHLLWGTLLYERSVVEYKLGLPTWEECLEVAVEKFELAGTSATDIAFIVKNHCSNETALEGFKIDEIVQAWNEMYDAQGWQFGDPSFRLEPLFRRRVPKLHSILEQF 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00759 748 Gene3D Tetratricopeptide repeat domain 33 172 IPR011990 GO:0005515
Spst9g00759 748 ProSiteProfiles TPR repeat profile. 115 148 IPR019734 GO:0005515
Spst9g00759 748 SUPERFAMILY TPR-like 41 556 IPR011990 GO:0005515
Spst9g00759 748 MobiDBLite consensus disorder prediction 387 406 - -
Spst9g00759 748 PANTHER PROTEIN CLMP1 1 746 IPR044517 -
Spst9g00759 748 SMART tpr_5 506 539 IPR019734 GO:0005515
Spst9g00759 748 SMART tpr_5 79 114 IPR019734 GO:0005515
Spst9g00759 748 SMART tpr_5 115 148 IPR019734 GO:0005515
Spst9g00759 748 SMART tpr_5 41 74 IPR019734 GO:0005515
Spst9g00759 748 SUPERFAMILY CAD & PB1 domains 287 376 - -
Spst9g00759 748 ProSiteProfiles PB1 domain profile. 288 367 IPR000270 GO:0005515
Spst9g00759 748 MobiDBLite consensus disorder prediction 372 386 - -
Spst9g00759 748 SUPERFAMILY TPR-like 444 580 IPR011990 GO:0005515
Spst9g00759 748 SMART PB1_new 288 367 IPR000270 GO:0005515
Spst9g00759 748 CDD PB1 291 364 - -
Spst9g00759 748 MobiDBLite consensus disorder prediction 371 406 - -
Spst9g00759 748 Coils Coil 508 535 - -
Spst9g00759 748 Pfam PB1 domain 288 365 IPR000270 GO:0005515
Spst9g00759 748 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
Spst9g00759 748 MobiDBLite consensus disorder prediction 1 28 - -
Spst9g00759 748 Gene3D - 282 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00759 Spst-Chr9 6492995 6495325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00759 25 148 Calmodulin-binding Proteins AT3G25230 31.618 2.71e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00759 K26538 - gmx:100805760 1189.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01531 8 16388775 16391118 Spst9g00759 9 6492995 6495325 PCT