Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00758 ATGTGGAATCCGTTGATCACTATCGTGACCCATCTCGGTGGTTCTCTTGCAGCGTCGTTGAATTTGTTAAATTTCCGTCCATGGCCGCCGTTTCCATTTGGCTCTTGGGTGGTTCCGTCGTTTGGAACCGTTCCGTTACCCGTGATGCCGTTGACCGTCCGTTACGTTCGTCCAGTTGCCTTGCGTGCTGTGTCAGACCTTAGCCCCATTAAGGCTGCTGGAAGCAGTAACCGATCCAAAGGTTGTGATAAGCTGAATCTTGGATGGAGCAAAAGCATGCTCCATGTTCCCCTGTTCTTCTCATCTGAGCACATCATGCCTTCCTTTTCCACACTCCGGCGATTCCCTCTGTTCATCCAACGCTTCCGTACCTTAAATTATTCCTCTTCTCCCAACCCACATCAAAATCCCAAGTGGGTTTCAGGTTCAGCCATTGTTGCAGGAGTAGCCTCTGCTCTTGCCCTCTTCTACTGCTACACCTCACCCAATTCACCCTTCGATTGCGTCTTCTTAAACAATTCCTCTCGCAGTACTTCATCTCCATTGTCTGGACAATCATCTCTTCCTGAAACTGCTCGTGGTTTGCTTGTTGGAGAACAGTACAGAACCAAGGTATTCTTCAACTATGAGAAGCGCCTACGGTTGCATAGTCCACCCGAAAAGGTTTTTGAGTACTTTGCATCTTGTCGTACTCCAGAAGGAGAGATACTCATGAAGCCAGTGGACCTAATGCGAGCAGTTGTTCCTGTTTTCCCTCCATCAGAATCCAACCTAGTAAGAGAGGGATACTTGAAAGGTGAAAGATGTCCTGGCCATTTGTACTGTCCCCCTTCGGAAATTTTTATGCTTTTTGATGTAGACAACGATGAACTTATATCTTTCAAAGAGTATATCTTTTTTGTAACTCTACTTAGCATCCAAGAATCAAGCTTCTCTGTAGCATTTAAAATGTTTGACAAGGATAATGACGGAGAGATAGACAAGGAAGAATTCAAGAACGTGATGCAATCAATGCAATCTCATACTAGACAAGGTCGTCACCACGGGGATGGAGGACGTACTGACCTTGTAGAGAATGGAGGGCTGGTGGAATACTTATTTGGTAAAGATGGAAAGGGACGCCTAAAGCATGATAAATTTGTTCAGTTTATCAGAGACTTGCATGATGAAATTGTGAGGCTGGAGTTTGCTCATTATGATTACAAATCTCGAAAAACTATATCGGCCAAGGACTTTGCACACTCCATTGTTGCTTCTGCTGACTTGAGTCATCTAGGCAGGTTGCTTGGACTGGTTGATGAATTAACCAATGATCCACGGTTTAAGGATGTACGCATAACATTTGAAGAGTTCAAAAACTTCGCAGAGCTGCGGAAAAAGTTATTACCATTTTCGTTGGCCCTTTTCAGTTTTGCAGAAGTACAAGGCCTGTTAACAAGAGATGATTTTCAGCGAGCTGCATCACATGTTTGTGATTTATCTCTCTCGGATAATATGGTTGAGATTGTTTTCCATTTGTTTGACGCGAATGGGGATGGAAGCCTGAGTACAGACGAGTTTGTTAGAGTGCTACAAAATCGAGAAAGAGACATTTCTCAAACTGTGGAGACAGGAATCGTGGGTTTCTTGTCGTGCTGCAGGAAATGTACGAACACCTCTCCATCTTCACGGCTGTTTTCCTGA 1683 0.4444 MWNPLITIVTHLGGSLAASLNLLNFRPWPPFPFGSWVVPSFGTVPLPVMPLTVRYVRPVALRAVSDLSPIKAAGSSNRSKGCDKLNLGWSKSMLHVPLFFSSEHIMPSFSTLRRFPLFIQRFRTLNYSSSPNPHQNPKWVSGSAIVAGVASALALFYCYTSPNSPFDCVFLNNSSRSTSSPLSGQSSLPETARGLLVGEQYRTKVFFNYEKRLRLHSPPEKVFEYFASCRTPEGEILMKPVDLMRAVVPVFPPSESNLVREGYLKGERCPGHLYCPPSEIFMLFDVDNDELISFKEYIFFVTLLSIQESSFSVAFKMFDKDNDGEIDKEEFKNVMQSMQSHTRQGRHHGDGGRTDLVENGGLVEYLFGKDGKGRLKHDKFVQFIRDLHDEIVRLEFAHYDYKSRKTISAKDFAHSIVASADLSHLGRLLGLVDELTNDPRFKDVRITFEEFKNFAELRKKLLPFSLALFSFAEVQGLLTRDDFQRAASHVCDLSLSDNMVEIVFHLFDANGDGSLSTDEFVRVLQNRERDISQTVETGIVGFLSCCRKCTNTSPSSRLFS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00758 560 SMART efh_1 499 527 IPR002048 GO:0005509
Spst9g00758 560 SMART efh_1 310 338 IPR002048 GO:0005509
Spst9g00758 560 SMART efh_1 276 304 IPR002048 GO:0005509
Spst9g00758 560 SUPERFAMILY EF-hand 279 384 IPR011992 -
Spst9g00758 560 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 177 551 IPR039800 GO:0005509|GO:0006851
Spst9g00758 560 Pfam EF-hand domain pair 476 526 IPR002048 GO:0005509
Spst9g00758 560 ProSiteProfiles EF-hand calcium-binding domain profile. 495 530 IPR002048 GO:0005509
Spst9g00758 560 ProSitePatterns EF-hand calcium-binding domain. 319 331 IPR018247 -
Spst9g00758 560 ProSitePatterns EF-hand calcium-binding domain. 508 520 IPR018247 -
Spst9g00758 560 Gene3D - 388 537 - -
Spst9g00758 560 CDD EFh 279 336 IPR002048 GO:0005509
Spst9g00758 560 Gene3D - 218 386 - -
Spst9g00758 560 CDD EFh_MICU 311 527 - -
Spst9g00758 560 Pfam EF hand 314 338 IPR002048 GO:0005509
Spst9g00758 560 ProSiteProfiles EF-hand calcium-binding domain profile. 306 341 IPR002048 GO:0005509
Spst9g00758 560 SUPERFAMILY EF-hand 366 530 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00758 Spst-Chr9 6483384 6491393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00758 187 489 EF-hand Containing Proteins AT4G32060 69.156 1.58e-146 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00758 K22827 - gmx:100786375 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00758 9 6483384 6491393 Spst9g00758 9 6483384 6491393 ECH
Spst8g01530 8 16381467 16385932 Spst9g00758 9 6483384 6491393 PCT