Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00745 ATGATGGACTCCGGAGCTCACTTCTGCAACTCCTGTGGTGAACAAGTTGGACTTGATGCTAATGGGGAGGTGTTTGTGGCTTGTCATGAGTGTTATTTCCCAATTTGCAAGGCTTGTTTTGAATATGAAGTCAATGAGGGTCGTAAGGTCTGCTTGAGATGTGCCACTCCCTATGCTGATAGAGCAAAAGATAACGATGAGACCAAGGCTTATGAAAATCAATCCACTATGGCTGCCCAGATCAATGTTTCTCAGGATGTTGGGCTCCATGCTAGGCATGTCAGTACTGTATCCACAGTGGATAGTGAACTGAATGATGAATCTGGGAATCCAATCTGGAAAAATAGAGTGGAAAGCTGGAAGGAGAAGGATAAAAAGAACAAGAAGAAAAAGTCTGCACCCAAGACTGAAAATGAGGCACCAATTCCACCAGAACAGCAGATGGAAGAAATACAGTCCTCAGAGGCTGCAGCTGCGGAGCCGCTTTCAACCATTATTCCAATCCCAAAAACGAGAATCACACCATACAGAATTGTGATAGTTGTGCGGTTGATAATCTTGGGTCTTTTCTTCCATTATCGAGTTACAAATCCTGTTGACAGTGCTTTTGGTCTGTGGTTGACATCCATCATCTGTGAGATCTGGTTTGCATTTTCCTGGGTATTAGATCAGTTCCCTAAATGGTATCCCATCAACAGGGACACTTTTATTGACAGGCTTTCTGCAAGATGCTTGAATGCTCACTTCTGCACTGTATATGCCAGATATGAAAGACCTGGTGAACCCTCTCAGCTTGCTGCTGTGGATTTCTTTGTTAGTACAGTCGATCCTCTGAAAGAACCGCCATTGATCACATCTAATACAGTGCTTTCTATTCTTGCTGTGGACTACCCTGTGGATAAAGTATCATGCTATGTGTCTGATGATGGTGCTGCAATGCTGACATTTGAGTCCCTTGTGGAGACAGCTGACTTTGCAAGAAAGTGGGTTCCATTTTGCAAAAAGTTTTCAATTGAACCACGCGCGCCTGAGTTCTACTTCTCTCAGAAGATTGACTACCTTAAGGACAAAGTACAGCCTTCTTTTGTGAAGGAACGTAGAGCAATGAAGAGAGACTATGAAGAGTTTAAAGTGAGAATTAATGCTTTGGTAGCAAAGGCTCAGAAAACACCGGATGAAGGTTGGACTATGCAAGACGGAACCGCGTGGCCAGGAAATAACTCACGTGATCACCCTGGCATGATTCAGATGCCTGATTTCTGCAAATTGGCTACCAAATTACTGAAAGAAGCAAATGTGGAAGTTTTTCTTGGACACAGTGGTGCCCATGACATAGAAGGATGTGAACTTCCCAGGTTGGTGTATGTTTCAAGAGAGAAAAGGCCAGGTTACCAACACCACAAAAAGGCTGGTGCTGAAAATGCACTGGTTAGGGTGTCTGCAGTTCTCACAAATGCTCCCTTCATTCTCAATCTTGATTGTGATCATTATGTGAACAATAGCAAGGCTGTTCGGGAAGCAATGTGTTTTCTGATGGATCCAGTAGTTGGTAGAGATTTATGCTATGTGCAGTTTCCCCAGAGATTTGATGGTATTGATCGTAGTGATCGATATGCCAATCGCAACACAGTTTTCTTTGATGTTAACATGAAAGGACTTGATGGCATTCAAGGACCCGTATATGTTGGAACTGGATGTGTTTTCAACAGACAAGCACTTTATGGCTACAGCCCACCTTCCATGCCTAAAATACCAAAATCATCATCCTGTTGCTGTTGCCCCTCAAAGAAGCAAACAAAAGATGTCTCGGAGCTTTATAGAGACGCAAAGAGAGAAGAACTTGATGCTGCCATTTTTAATCTCAGGGAGATTGACAATTATGATGAATATGAGAGGTCAATGCTGATTTCACAAATGAGCTTTGAGAAAACATTTGGTTTGTCCACTGTTTTCATTGAATCTACACTAATGGAGAATGGAGGTCTGCCAGAATCTGCTGACCCCTCAATGCTGATCAAAGAGGCCATTCATGTTATTAGCTGTGGATATGAAGAGAAGACTGCATGGGGAAAAGAGATCGGATGGATCTATGGTTCAGTGACAGAGGATATCTTAACGGGGTTCAAGATGCAATGCCGAGGATGGAGGTCAGTTTACTGCATGCCCTTAAGGCCTGCATTCAAAGGATCAGCACCAATCAATCTTTCTGATCGGTTGCACCAAGTTCTTCGATGGGCCCTTGGATCAGTTGAAATCTTCTTCAGTAGGCATTGCCCCCTCTGGTATGGTTTTGCAGGAGGTCGCCTAAAATGGTTGCAGAGACTTGCTTACATAAACACCATTGTCTACCCATTTACGTCCCTTCCTCTCGTTGCTTATTGCACTTTGCCGGCAATTTGTCTTCTCACAGGAAAATTCATCATACCAACGCTTTCCAACCTTGCAAGTGCCCTCTTTCTTGGACTTTTCCTGTCTATTATAATCACTAGTGTGCTTGAGCTGCGGTGGAGTGGTGTGACCATTGAAGCTTTGTGGCGTAATGAGCAGTTCTGGGTGATTGGAGGAGTTTCAGCCCATCTGTTTGCTGTGTTCCAAGGATTCCTCAAGATGTTGGCTGGTGTTGACACTAACTTCACTGTCACTGCCAAAGCTGCGGATGACACAGAGTTTGGTGAGCTATATATGATCAAGTGGACCACGCTCCTAATTCCTCCAACCACCCTTATCATTATTAACATGGTTGGTGTTGTGGCTGGATTTTCTGATGCACTTAATGGAGGATATGAGTCTTGGGGACCACTTTTTGGAAAGGTTTTCTTTGCCTTCTGGGTTATTTTCCATCTCTATCCATTCCTCAAGGGTCTCATGGGTCGCCAAAACCGTACTCCAACCATTGTGATTCTGTGGTCAGTGCTGTTGGCCTCTGTCTTCTCTCTGGTGTGGGTCAAGATTAACCCTTTTATCAGCAGAGCTGACAGTTCAAGCCTCTCCCAGACCTGCATTTCTATAGATTGTTAA 3018 0.439 MMDSGAHFCNSCGEQVGLDANGEVFVACHECYFPICKACFEYEVNEGRKVCLRCATPYADRAKDNDETKAYENQSTMAAQINVSQDVGLHARHVSTVSTVDSELNDESGNPIWKNRVESWKEKDKKNKKKKSAPKTENEAPIPPEQQMEEIQSSEAAAAEPLSTIIPIPKTRITPYRIVIVVRLIILGLFFHYRVTNPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWYPINRDTFIDRLSARCLNAHFCTVYARYERPGEPSQLAAVDFFVSTVDPLKEPPLITSNTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEFKVRINALVAKAQKTPDEGWTMQDGTAWPGNNSRDHPGMIQMPDFCKLATKLLKEANVEVFLGHSGAHDIEGCELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPVVGRDLCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYSPPSMPKIPKSSSCCCCPSKKQTKDVSELYRDAKREELDAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSTVFIESTLMENGGLPESADPSMLIKEAIHVISCGYEEKTAWGKEIGWIYGSVTEDILTGFKMQCRGWRSVYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYGFAGGRLKWLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASALFLGLFLSIIITSVLELRWSGVTIEALWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDTEFGELYMIKWTTLLIPPTTLIIINMVGVVAGFSDALNGGYESWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLVWVKINPFISRADSSSLSQTCISIDC 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00745 1005 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 80 IPR013083 -
Spst9g00745 1005 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 160 970 - -
Spst9g00745 1005 MobiDBLite consensus disorder prediction 116 136 - -
Spst9g00745 1005 FunFam Cellulose synthase 1 82 - -
Spst9g00745 1005 SUPERFAMILY RING/U-box 2 71 - -
Spst9g00745 1005 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 430 577 IPR029044 -
Spst9g00745 1005 MobiDBLite consensus disorder prediction 115 154 - -
Spst9g00745 1005 FunFam Cellulose synthase A catalytic subunit 4 439 578 - -
Spst9g00745 1005 Pfam Cellulose synthase 268 996 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst9g00745 1005 SUPERFAMILY Nucleotide-diphospho-sugar transferases 432 798 IPR029044 -
Spst9g00745 1005 Pfam Zinc-binding RING-finger 4 60 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00745 Spst-Chr9 6388553 6394336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00745 1 1005 Glycosyltransferase AT4G18780 79.704 0.0 1658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00745 K10999 - gmx:100806522 1825.06