Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00726 ATGTCTATTTTACCGAAAGGCGATTCGGTTCAAATTAGAGAGGTTTGGAACGATAACCTGGAAGAGGAGTTTGCGTTGATCCGGGAAATTGTGGATGAGTACAACTACGTGGCTATGGATACGGAGTTTCCTGGCGTGGTTCTCCGTCCGGTGGGAAATTTCAAGAACATCAACGACTACAACTATCAAACTTTGAAGGACAACGTAGACATGCTGAAGCTGATCCAATTAGGTCTCACCTTCTCCGACGAGAACGGGAACCTCCCTATCTGTGGCAGCGAAAGTCCATGCATCTGGCAATTCAACTTCCGCGAATTCAACATCAGCGAAGACATTTTCGCCAGTGATTCGATCGAGTTGTTACGCCAGTGTGGGATCGATTTCAAGAAGAACAGCGAGAAGGGAATTGATGTGAATCGGTTTGGGGAGCTTCTCATGTCCTCAGGAATCGTGTTGAACGATGCTGTTCATTGGGTTACCTTCCACAGCGGCTATGATTTTGGTTACCTCCTTAAACTGTTGACATGCCGAACCTTGCCGGATACGCAGGCTGGGTTCTTTGATTTGATCAAGATGTATTTTCCAATGGTGTATGATATCAAGCATCTGATGAAGTTCTGCAACAGCCTCCATGGTGGACTGAACAAGCTTGCCGAATTGTTGGAGGTGGAAAGGGTTGGTGTGTGCCATCAGGCTGGGTCTGATAGTTTACTCACTTCTTGTACATTTAGAAAGTTGAGGGATACATTCTTCAATGGCTCGACGGAGAAATATGCTGGTGTCTTGTATGGTTTAGGTGTTGAGAATGGACAGACTAATTGA 822 0.4574 MSILPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPICGSESPCIWQFNFREFNISEDIFASDSIELLRQCGIDFKKNSEKGIDVNRFGELLMSSGIVLNDAVHWVTFHSGYDFGYLLKLLTCRTLPDTQAGFFDLIKMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTSCTFRKLRDTFFNGSTEKYAGVLYGLGVENGQTN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00726 273 FunFam Putative CCR4-associated factor 1 7 2 269 - -
Spst9g00726 273 Pfam CAF1 family ribonuclease 15 136 IPR006941 -
Spst9g00726 273 SUPERFAMILY Ribonuclease H-like 12 265 IPR012337 -
Spst9g00726 273 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 266 IPR039637 GO:0004535|GO:0030014
Spst9g00726 273 Gene3D - 2 269 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00726 Spst-Chr9 6209704 6210525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00726 K12581 - gmx:100798365 547.74