Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00720 ATGAAAGCGGAGCATCCAACCAAAAGACTTCGAAATAATAAGCATCCACGTCATGAAAAGCACCACGTGTTGGATCTCGATTGGGTGAAAGCATGTAAAGTAACGTGTCTCCAAGACTCCAGCGTAGATCAAAGTAAACTCGCGTGTCGTTCCCGGTCCGCGTCGGGCCATTGCAGAGACCATTTAGAAAGCAAAGCAAGTTTCATCATTCTTTGGCAGCGACGTGAATGCGCTCTTTCTCTTTCTTTCGATCTGGATAGTAAATCGGGTCGAACCGTGGCTTCCTCAGGGTCGCAGAACCTTTCTCGAAGAAAGACTTCCTCTTCTTCTTCATCTTCTTCTCATCAACAAACGTCCGGGTCGACCCGGATCGTTTACCGGGAGTCGCGGGGCACCTCGGAGTCCGATTTACCGATCTGGCAGCAGAACTGGTTCATCGCATTGCTATTCGTCATGGCTCTTGGATTCTTCGCCCTCGCTCTCTTCCTCTTCCTCACTCTTGACACTGAATTCGCTCCTTCTTCCACTGCCTCCGCCTCCGCCGCTTCCTCCGAAGGCGTCGAGGTGCAGGTTACGTATGGCACGGTGCTGAAGCTTATGCACGAGAAGACCAAATTTCGGTTGCATTCTCATGACGTGCCCTACGGTTCTGGCAGTGGACAACAATCGGTTACTGGCTTCCCCAATGTTGACGATTCCAATAGTTACTGGATTGTTAGACCTCAGCCAGGAACTAATGCTAAACAAGGTGATGCCATTAAAAGTGGTACAATCATTAGACTACAGCATATGAGGACAAGGAAGTGGCTACACAGCCATTTGCATGCATCCCCTATATCAGGCAATCTTGAGGTGAGTTGTTTCGGAGGAGAAAATGAATCTGACACTGGTGACTACTGGAGGCTTTTAATAGAGGGAAGTGGGAAGACTTGGAAGCAGGATCAGAAGATTCGCCTTCAGCATATTGACACTGGAGGCTATCTGCATAGTCATGATAAGAAATACAGCCGCATTGCTGGGGGGCAGCAGGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGACAATGTGTGGTTGGCAGCTGAAGGTGTCTACCTTCCGGTCACGGAGAGCAAATAA 1116 0.4928 MKAEHPTKRLRNNKHPRHEKHHVLDLDWVKACKVTCLQDSSVDQSKLACRSRSASGHCRDHLESKASFIILWQRRECALSLSFDLDSKSGRTVASSGSQNLSRRKTSSSSSSSSHQQTSGSTRIVYRESRGTSESDLPIWQQNWFIALLFVMALGFFALALFLFLTLDTEFAPSSTASASAASSEGVEVQVTYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTNAKQGDAIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGENESDTGDYWRLLIEGSGKTWKQDQKIRLQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTESK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00720 371 Pfam MIR domain 209 355 IPR016093 -
Spst9g00720 371 SUPERFAMILY MIR domain 189 362 IPR036300 -
Spst9g00720 371 Gene3D - 174 371 - -
Spst9g00720 371 ProSiteProfiles MIR domain profile. 188 242 IPR016093 -
Spst9g00720 371 SMART mir_2 188 242 IPR016093 -
Spst9g00720 371 SMART mir_2 250 305 IPR016093 -
Spst9g00720 371 SMART mir_2 308 362 IPR016093 -
Spst9g00720 371 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 152 366 - -
Spst9g00720 371 MobiDBLite consensus disorder prediction 88 125 - -
Spst9g00720 371 ProSiteProfiles MIR domain profile. 308 362 IPR016093 -
Spst9g00720 371 FunFam Stromal cell-derived factor 2-like protein 174 371 - -
Spst9g00720 371 ProSiteProfiles MIR domain profile. 250 305 IPR016093 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00720 - - pcin:129303880 432.565