Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00718 ATGGTTCTAACCAGGTTATCTGAAAATTTCAGGGAACATCATCCAGAAAATGTTTTTTCATCCATGGAAACAATTATGACCCTTGTTATAGAGGAAAGTGAAGATATATCCTTAGGTCTTCTGTCTCCACTACTGGACAGCATTAGGAAAGACAACGAGGAAGTTTTTCCAATTGCCCAAAAATTGGGGGAGAGGATCCTTGAAAGTTGTGCAACCAAGCTCAAACCCTACTTGGTTCAAGTGGTGAAATCCTTGGGTATATCCATGGATGATTATAGTTCTGTACTTGCTTCAATATGCCAAGATACATCTGATGATCTGGAGAAAAATGATACCTGTGTGACTAGTGAGCATGTTGAAGATAAGAGTGAGTCAGCAAAACAATCACTGGAGGAGTCAACTCGTGTGGTTAAAAAGGATTCAAGGGAAGTTACATCCTCTCAACAAGAAAATCCCGATGCGAATAAATCTCCTAACTCAGTCATGAGCTATGGTGTTACATGTGTTGGAGAAGATACTGCTTTAACTGATTCCAATCCCATCAAAAAGCAAGAGGATGCTGATTGCTCTAATCACTCTGAAGGGTTGAATATATCTGGTCATGAGGTGCGTAAAGATTTGGACATTGAAATGGTTGACAATAGTAAAAAAACAGCAGGAAAATCTACCAAGAGATCACGAAAGAAATCAAGCTCTTCATCTAAATCCACAAAGCCTTCCCAGGCTCTAGTTGCTACTAATGAGAAGGAAACTGAGAAAATGCGTGACTATGAAAGCAACAGCAAAATAATTCCCAGTTCCCCACATGAGGAGCATTTTGTTGAAGCAGCAGGACCTTCAGGGAATAACAAAGAAAATGATGCTAAGATTTCTTTATCAAAGGCATTCAATGATGAATCTGAAGTTGAGGTTTCGATTCCAAGTGAAAGCCTCTATGATGAAAATCATTCCAAGAAATTTGGACGATCAAAAAAGAAATATGATCCTGTAAAAGAAGGTGCTGCAGTTGATGTTTCAAAGGTTTCTGGAGGAGCTAGTGATTCAGAAGCTAAACCTGGTAGGCGGTCAGTGAAAAAGGCACTTAGTCAAAAGTCTGATGTGAAAAAAACTAGTGTGGAAGATTCAGTAAAAAAAGGAAGTGGGGCAACAAATAATGCTGATGCAAAAAAGTACTCAGCCAAGAAATTAGATGAAAACAAAAAGGGTGGTGGTGGTGGATCCTCTTCAAGGCAGATGGAAGACAGGAGAAAGGGAGGGCGGGGGAAAGAGAAGTCTGAAACAGATGTAGCAAAAACATCTGCAATGGATGTGGACAAGGAAATGGTTTCTTCTCCGAGGTCTGGTATTAAATCAACTAAATATGAAAGTTCAGAGGAGACTCCCAAGACAAGTGTGAAAAGGAAACATACTGCAGGAGATGAGTCTGATACGAAAGAATATGGTGAAAACCTTATCGGTTTACGGGTCAAAGTTTGGTGGCCTAAGGATCGTGAGTTTTACAAAGGTGTTATTGATTCTTTTGATTCTTCCAAAAAGAAGCACAAGGTCTCTTATGATGATGGTGATGAAGAAGTATTAAATCTTGTGAAGGAAAAATGGAAGGTCATTAAAGAGGACTCAGATGCAGAAGAGGATGAACGAAGCGACCACCCAAGTCTTGATGCTTCCACTGATGTGCCCCCAAAGAAGAAAGGGAAAACAAGTGCTGGTCAATCAACTAAGCAAGGAAAGATGGATGCTTCTTCCAGAAGTGGGGGAACAACATCATCTAGTAGATCAAAAAGTGTATCCATGAAATCTAGCCACAACTCCAAGACTATTAGGAAATCTGAGGATGAAATTAATAGAAAATCCAAGGACAGCACTCCTAAAAGTGTTAGCAATAAATCTATTGTTTCTGCTAAAAAAATGAGTGATAAATTGAAAAACATTGATACTTCGAAGACCAGGGAATCAAAGGATGATGATAATACCACACCAAAGACCTCTTCCAAGTCTAAGCAAGAAATTATAAAAAGTGGAAAATCCGAGAAAGCAACCCTAAAGACTGCCATGTCCAGAGGAAAACCTCTGAAAAGTGGTGGAAAGACTGATGTTAATGGTACCGGCAAGGTGAAATCTGGTTTATTGAAGAAAAAAAAATTTGAGAATGAGAATTCAGAAGGAGAGGTAGAAGATGCCAAGGGCAAGACTTCAACTTCATTTAAGGCTCAAGAAAGTGAGCCTAAGAGTGGAAAGAAGCGGCGGAGAACTTAG 2256 0.3949 MVLTRLSENFREHHPENVFSSMETIMTLVIEESEDISLGLLSPLLDSIRKDNEEVFPIAQKLGERILESCATKLKPYLVQVVKSLGISMDDYSSVLASICQDTSDDLEKNDTCVTSEHVEDKSESAKQSLEESTRVVKKDSREVTSSQQENPDANKSPNSVMSYGVTCVGEDTALTDSNPIKKQEDADCSNHSEGLNISGHEVRKDLDIEMVDNSKKTAGKSTKRSRKKSSSSSKSTKPSQALVATNEKETEKMRDYESNSKIIPSSPHEEHFVEAAGPSGNNKENDAKISLSKAFNDESEVEVSIPSESLYDENHSKKFGRSKKKYDPVKEGAAVDVSKVSGGASDSEAKPGRRSVKKALSQKSDVKKTSVEDSVKKGSGATNNADAKKYSAKKLDENKKGGGGGSSSRQMEDRRKGGRGKEKSETDVAKTSAMDVDKEMVSSPRSGIKSTKYESSEETPKTSVKRKHTAGDESDTKEYGENLIGLRVKVWWPKDREFYKGVIDSFDSSKKKHKVSYDDGDEEVLNLVKEKWKVIKEDSDAEEDERSDHPSLDASTDVPPKKKGKTSAGQSTKQGKMDASSRSGGTTSSSRSKSVSMKSSHNSKTIRKSEDEINRKSKDSTPKSVSNKSIVSAKKMSDKLKNIDTSKTRESKDDDNTTPKTSSKSKQEIIKSGKSEKATLKTAMSRGKPLKSGGKTDVNGTGKVKSGLLKKKKFENENSEGEVEDAKGKTSTSFKAQESEPKSGKKRRRT 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00718 751 MobiDBLite consensus disorder prediction 452 481 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 116 146 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 537 751 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 147 164 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 566 603 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 604 623 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 537 561 - -
Spst9g00718 751 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 118 709 IPR039776 GO:0007064
Spst9g00718 751 MobiDBLite consensus disorder prediction 198 220 - -
Spst9g00718 751 SUPERFAMILY Tudor/PWWP/MBT 483 524 - -
Spst9g00718 751 FunFam Binding protein 480 532 - -
Spst9g00718 751 CDD Tudor_Agenet_AtEML-like 485 535 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 233 247 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 635 676 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 709 732 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 410 435 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 312 333 - -
Spst9g00718 751 Pfam Sister chromatid cohesion protein PDS5 protein 10 85 - -
Spst9g00718 751 Gene3D - 481 532 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 116 164 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 176 481 - -
Spst9g00718 751 Coils Coil 710 730 - -
Spst9g00718 751 MobiDBLite consensus disorder prediction 351 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00718 Spst-Chr9 6145161 6149883 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00718 - - gmx:100809147 994.186