Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00717 ATGCTTGATCGCTTAAAAAGGAGATTTGTCAAAGAAAGACACCAATGGAGAGAAGTAGAGGAGAGAGTGTCCCCAGTGTTAGGTAAAAAAATTAGAGACTCAGATATTGCACAACCAATTATGTCTAAAGATAAAGAATTGGAAGAACAACTCCTTGAAGCCGGTAACAAGCTCGCAGATCCTCCTTCTTTGGTGGAGGAACTTCTCCCACTCCTTCATGGCATAGGAGCACCCCCTGGACCCCATAATCTATTTGATGTGGAGCTAGGGGTTTCAGCTTGGGCTACCGGTGTTGTTGGATCTGAGTATGTTGTTCCATGTTCTTTACAGTCTTTGACTGTCCTCTCAGCTCCCATTGCTCACCTTCTATCACCTAGGGACTCTTTAGGTTTGCAGCAAGTAGAGAGTTGCCTATTAAGGGTTGAACAGTCACCTACATCCTCTATGCAAAATGCGCTCTCTCCATCATCGAAAGCATTAATTGCAGACAAGCTTTTGCAACACTCGGATGATAATGTCAAAGTTGCAGTTGCTTCTTGCATCAGTGAAATAACAAGAATCACTGCACCTGAAGCTCCTTATAATGATGATCAAATGAAGGAGGTCTTTCAATTAATAGTATCTTCGTTTGAAAATCTACATGATAAGTTAAGCCAATCATATGCAAAGAGGATAGCTATTCTTGAAACTGTTGCAAAAGTTAGATCATGTGTGGTTATGCTGGACCTTGAATGTGATACCCTGATTTTGGAGATGTTTCAACATTTCGTGAAAACAATAAGGGAACATCATCCAGAAAATGTTTTCTCGTCCATGGAAACAATTATGACCCTTGTTCTAGAGGAAAGTGAAGATATATCCTTAGACCTGCTGTCTCCACTTCTCACCAGCATTAAGAAAGACAAGGAGGAAGTTTTTCCAATCGCCAAAAAATTGGGGGAGAGGGTTCTTGAAAATTGTGCAACCAAGCTTAAACCCTACTTGGTTCAAGCAGTGAAATCCTTGGGTATATCTGTTGATGATTATAGTACAGTAATTGCTTCAATATACAAGGATGCATCTAATGACTTGGCAAAAAATGACACATGTGTTACTAGTGTGCAAATGAAATGTAAGAGTGAGTCAGCAAAACAACCATTTGAGGAGTCAATGCATGTATGCACCCACTTTAATGCTCTTGTTTTTTATGCATCCTGTGGTTCTAGACTTTTATCTTCCGGAGTTGCATACTCATGTTGGTTGTGGTTTGATCAGGTGTTTAAAAAAGATTCAAGGGAAGTTATACCCTCTCAACAAGAGAATCCTTATGCGAATATATCTCCAAAGTCAGTCATGAGCAATGGCGTTGCATGTGTTGGAGAAGATAATGCTTTTGTTGATTCCAAGTCCAATAAAAAGCAAGAGGATATTGATTGTTGTAATCACTCTGAAGGTTTCAACAAAACTCGTCATGAGGTGCACAATGATTTGGATATTGAAGAAGTTGACAAGATACAAAAGTCAGAACATTCTACCAAGAGACAACAGAAGAAACCAAGCAATTCGACTAAATCTGTAATACCTTCCAAAGGTCAAGTTGCTGCTTATGAGAATGGGACTGAGAGAATGCTGGACTATGAAAGCAACAGCAAGAAAGTTCCCAGTTCCCCTCGTGAGGACCATTCTGTTGAAGCAGCAGGAGCTTCAGAGAATGACAAAGAAATTGACACTGAGATTTCATCACCAAAGGCATGCAACGTTGAATCTGAAGTATCTGCTTCTCCAAGTGAAAGCTTCCATGATGGAAATCTTTCGAAGAAACTTGGACGAACAAGAATGAATGATGGCTCTGTAAAAAGAGCTGCAGAGGATGTTTCAAAGGTGTCTGCAAGAGCTAGTGATTTAGAAGTAAAACCTGCTCGTCTGTCAGTGAAAAAGGCACTTGGTCAGAACTCTGATGTGAAAACCACTAGTGTCGTCAATTCAGTAAAAAAAGGAAGTGGCTCAACAATTGATGCAAATACTAAAAAGCACTCAGCCAATAAATTAGATGAAGACAAAAAGGGTACAGGTGGATCCTCTTCAAGACATACAAGGGACACGAAAAGGAGAGGGCAGGGGAAAGCTAACTCAGAAACAGATTTAACAAAATCATCTGCTATGGATGTGGACAAGGAAATGGTTTCTTCAAAGTCTGGTACAAAATCAACTAAAGATGGAAATCCAGCGACTCCCAAGACAACTGTGAAAATAAAACTTAATTCAGGAAAAGAAAATGTGTCTGATGTGAAGGAATGTGGTGAAAACCTTGTGGGTTTACGGGTCAAAGTTTGGTGGCCTAAGGATCGTTCGTTTTACAAAGGTCTTATTCATTCTTTTGATTCTGCCAAAAAGAAGCACAAGGTCTTCTATGATGATGGAGATGAAGAAACGTTAAATCTTGTGAAGGAAAAATGGAAGGTCATTGACGCTAACATAGATGCAGATGAGGAGGAACAAAGTGATCGTGCAAGTCTTGATGATTCCACTGATATGCCACCAAAGAAGAAAGGAAAAACAAGTATTGGTGAGTCAAGCAAAGAAGGAAAGACTGATGGTTCTTCCAGAAGAGGTGGAGCAATAGCATCCAGTAGATCAAAGGGTGCATCTATGAAGTCTAGCAACAAGTCCAAAGATGGTAACAAATCCAAATATTTCAAGACTATTAACAAATCTGAAGATGAAGTTAGTAGAAAATCTAAGGACAGCACTGCTAAAATTGATAACAGTAAATCTATTCTTGCCGCTAAAAAAATGAACAATAAATCCAAAAACACTGATACTTCCGAGACAAGTGAATCAAACGATGATGACACTAGCATGCCAAAATCCTCTTCTAAGACTAAGCAAGAAACGTCCAAAAGTGGAAAATCCAAACTAGAAACCCTGAAGACTACCATATCGAAAGGAAAACCTCTTAAAAGTGGTGGAAAGACTGATGTTAATGGTGGTGGTATGGTGAAATCTGCTTTGTTGAAGAGAAAAGATTCCAAGAATGAGAACTTGGATATCTCAGCAGGAGAAGTAAAAGATGCGAAAGGAAAGACTTCACATTCATCAAAGGCAAAAGGAAATGAACTCAAGAGTGGAACGAAGCGTCTGAGAAGCTAG 3129 0.395 MLDRLKRRFVKERHQWREVEERVSPVLGKKIRDSDIAQPIMSKDKELEEQLLEAGNKLADPPSLVEELLPLLHGIGAPPGPHNLFDVELGVSAWATGVVGSEYVVPCSLQSLTVLSAPIAHLLSPRDSLGLQQVESCLLRVEQSPTSSMQNALSPSSKALIADKLLQHSDDNVKVAVASCISEITRITAPEAPYNDDQMKEVFQLIVSSFENLHDKLSQSYAKRIAILETVAKVRSCVVMLDLECDTLILEMFQHFVKTIREHHPENVFSSMETIMTLVLEESEDISLDLLSPLLTSIKKDKEEVFPIAKKLGERVLENCATKLKPYLVQAVKSLGISVDDYSTVIASIYKDASNDLAKNDTCVTSVQMKCKSESAKQPFEESMHVCTHFNALVFYASCGSRLLSSGVAYSCWLWFDQVFKKDSREVIPSQQENPYANISPKSVMSNGVACVGEDNAFVDSKSNKKQEDIDCCNHSEGFNKTRHEVHNDLDIEEVDKIQKSEHSTKRQQKKPSNSTKSVIPSKGQVAAYENGTERMLDYESNSKKVPSSPREDHSVEAAGASENDKEIDTEISSPKACNVESEVSASPSESFHDGNLSKKLGRTRMNDGSVKRAAEDVSKVSARASDLEVKPARLSVKKALGQNSDVKTTSVVNSVKKGSGSTIDANTKKHSANKLDEDKKGTGGSSSRHTRDTKRRGQGKANSETDLTKSSAMDVDKEMVSSKSGTKSTKDGNPATPKTTVKIKLNSGKENVSDVKECGENLVGLRVKVWWPKDRSFYKGLIHSFDSAKKKHKVFYDDGDEETLNLVKEKWKVIDANIDADEEEQSDRASLDDSTDMPPKKKGKTSIGESSKEGKTDGSSRRGGAIASSRSKGASMKSSNKSKDGNKSKYFKTINKSEDEVSRKSKDSTAKIDNSKSILAAKKMNNKSKNTDTSETSESNDDDTSMPKSSSKTKQETSKSGKSKLETLKTTISKGKPLKSGGKTDVNGGGMVKSALLKRKDSKNENLDISAGEVKDAKGKTSHSSKAKGNELKSGTKRLRS 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00717 1042 MobiDBLite consensus disorder prediction 539 572 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 997 1042 - -
Spst9g00717 1042 SMART TUDOR_7 760 819 IPR002999 -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 539 742 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 883 912 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 831 860 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 913 934 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 575 594 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 942 964 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 726 742 - -
Spst9g00717 1042 CDD Tudor_Agenet_AtEML-like 764 814 - -
Spst9g00717 1042 Pfam Sister chromatid cohesion protein PDS5 protein 131 330 - -
Spst9g00717 1042 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 422 962 IPR039776 GO:0007064
Spst9g00717 1042 MobiDBLite consensus disorder prediction 670 703 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 500 525 - -
Spst9g00717 1042 FunFam Binding protein 759 811 - -
Spst9g00717 1042 Gene3D - 755 809 - -
Spst9g00717 1042 SUPERFAMILY ARM repeat 141 360 IPR016024 -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 863 882 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 818 1042 - -
Spst9g00717 1042 SUPERFAMILY Tudor/PWWP/MBT 762 804 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 596 624 - -
Spst9g00717 1042 MobiDBLite consensus disorder prediction 642 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00717 Spst-Chr9 6132806 6144322 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00717 - - gmx:100809147 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00717 9 6132806 6144322 Spst9g00717 9 6132806 6144322 ECH