Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00709 ATGATGCTTCGGTTCCTTCTGCCACTTGTCGTGTTGGCGAGTTGTAAGGAGAGTAACAAAATGGCGAAAGCACAGTATACAGTAGATTCAGCCAGAGCGTCTTTGGTTAGACAAGAAGACACCATAATATTTGCTTTGATCGAGAGAGCCAGGTTTCCTTTGAATTCCCCAACTTACAATCAGAGTTACACTTCCATTCCCCAATTTCAAGGTTCATTGCTTGACTTTGTCATCAGCAATACAGAGGCCATGCAGTCCAAGGCAGGAAGATACATTAATCCTGAAGAAAATCCTTTCATCCCAACAAATTTACCACCCTCGGTTGTGCCACGTTACCCCTTCTCACAGTTTTTGCATCCTGCAGCTGCTTTGATTAACATGAACAAGGAAATTTGGAAACTGTACTTCAATGAGCTGCTTCCAATGTTTGTTGCTTCCGGTGATGATGGCAACTATGCACAAACTGCTGTGACCGATCTTATGTTGTTGCAGGCCATCTCTAGAAGGATTCATTACGGAAAATTTGTAGCTGAGGCCAAATTCAGAGAAGCTCCTCAAGGCTATGAGCCTTTAATTCGTGGCAGGGACAGGGAAGCATTGATGAAATTGTTGACATCTGTGAGAGTTGAAGAGATGGTGGTGAAGAGGGTTGAAAAGAAGGCCATGGTGTTTGGACAGGAAGTGAGTCTTGACCATGATGTCAAGGGAGGAACATACAAGGTTGATCCATCAGTGGTTTCTCTCTTGTACCAGAAATGGTTAATACCCCTCACAAAAACTGTTGAAAGTAGAAGAGAGTGTAGAAAGATCAAAACCCTAAACTATAACCCTAGCTTCGTAAAACGCATTGATTAG 855 0.4292 MMLRFLLPLVVLASCKESNKMAKAQYTVDSARASLVRQEDTIIFALIERARFPLNSPTYNQSYTSIPQFQGSLLDFVISNTEAMQSKAGRYINPEENPFIPTNLPPSVVPRYPFSQFLHPAAALINMNKEIWKLYFNELLPMFVASGDDGNYAQTAVTDLMLLQAISRRIHYGKFVAEAKFREAPQGYEPLIRGRDREALMKLLTSVRVEEMVVKRVEKKAMVFGQEVSLDHDVKGGTYKVDPSVVSLLYQKWLIPLTKTVESRRECRKIKTLNYNPSFVKRID 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00709 284 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 21 266 IPR037039 GO:0004106|GO:0009073
Spst9g00709 284 ProSiteProfiles Chorismate mutase domain profile. 19 271 IPR008238 GO:0004106|GO:0009073
Spst9g00709 284 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Spst9g00709 284 SUPERFAMILY Chorismate mutase II 25 263 IPR036263 GO:0046417
Spst9g00709 284 PANTHER CHORISMATE MUTASE 14 262 IPR008238 GO:0004106|GO:0009073
Spst9g00709 284 PIRSF Chor_mut_AroQ_eu 14 269 IPR008238 GO:0004106|GO:0009073
Spst9g00709 284 FunFam Chorismate mutase 19 270 - -
Spst9g00709 284 NCBIfam chorismate mutase 28 262 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00709 Spst-Chr9 6044554 6047831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00709 K01850 - gmx:100791095 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00709 9 6044554 6047831 Spst9g00709 9 6044554 6047831 ECH