Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00706 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGCTCTTCAAGCTGATGGAAACTCCATAAGGTCAGTGCCAGTAGATGCAAAAAATCCAAATGAGGTCCTAGTGGACCCTGAGAAAATTTACAAGGGTGGAATTCATGCAGAAAGAAGGACCCGTTTCCCAATGATAATAAGGTATGTGTCATCTGAATTGGCTACAGACGTTTCTGTTAATGTTGGTGATGTCAAGTATCACCTTCACAAGTTCCCTCTACTGTCAAAGAGCAACCGACTACAAAAATTGGTATCAAAAGCTAATGAAGAGAACTCTGATGATGATATTTACTTGGATGATTTCCCTGGAGGACCAAAGGCCTTTGAAATATGTGCGAAATTCTGTTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTTGCTGCTCGTTGTGCAGCCGAGTATCTTGAGATGACTGAGGATGTTGATAGAGGAAACTTGGTTTTAAAGATTGAGGTGTTTCTTAACTCAAGTATCTTCCGCTGCTGGAAGGATTCTATAATTGTTCTCCAAACTTCTAAATCTCTTCTGCCATGCTCTGAGGACCTGAAGATCATTGGGAGATGCATAGACTCCATAGCTTCTAAAACTAGTGTGGACCCAGCATACATCACTTGGTCTTACACTTATAATAGGAAATTAACTGAGCCTGATAAAATTGTTGAGGACAAGATGACATTTCTAGAGAAAATTGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGACATATGTGAGCTGGACATTGATCTTTACAAACGAGTACTGGTTGCTGTGAAATCAAAGGGAAGAATGGATGGCGTTGTTATTGGAGAGGCGCTAAAAACCTACGCCTTAAGATGGATACCTGATTCTGTCGAAACATTGGTTTCTGGTGCCAATGCCTCAAGGACTAAATCTGTGGTAGAAACAATTGTATGTTTATTGCCATATGATAATGGCATTGGTTGTTCGTGTAGTTTCTTGCTGAAGCTATTGAGAGTTGCCATATTAGTTGGAGCAAATGAGTCATCAGCAAAAGAATTGACGAAGAGCATTAGCCTCAAATTGCATGAAGCTTGTGTCAAAGATTTATTGATTCCAGCAAGGTCTCTCCAGATTACTACGTATGATGTTCATTTGGTACAAGGTCTTTTGAATCAATATATGAATCACGAAAAGGGGAGCTGTGGTATGGACGTTGTCCAGGAAAAACATGGAGAAGATACATATATTTTAGGACGAAGGTCCTTATTGACTGTTGGCAAGTTGGTGGATGCTTATCTTGGAGAAATTGCACATGATCCTAATCTTGGCCTCTCTAGTTTTGTTGATCTGTCACAATCCATTCCAGATTTTGCTAGACCAGATCATGATGGTCTATACAGAGCTATAGACGTCTACTTGAAGGAGCACCCAGAATTGACTAAAGCAGAAAGGAAGAAACTATGTGGACTGATGGATGTCCGGAAATTAACAGCTGATGCTTCCATGCATGCTGCGCAGAATGAATGTCTTCCTCTTCGAGTTGTAGTTCAAGTTCTGTTCTTTGATCAGGTCAGGTCTTCTATCAGCTTTCAATCACTCGGCAACAATAGCACGCGTGACCCTTCACCCTCTCCAATGAATCGAGATGAGGGGTATAAGAAAACAATGGGAGATAGCTGCCAACCCATCAAGAACCAGATGACCCATTTGAGGATCAAGGATGAAGAGTTACATAAAAATGGGAAATTAGGTAAGAAGAATAGCAAAAATAGCAAAAGTGGCCTTCAGTTGCTTCCATCAAGATCAAGGAGAATTTTTGACAAGTTATGGAGTGTGAGAAAAGTACAAGGAGAGAATAAAAGCTCAGAGACTTCAGGGAGTTCTAGTAGCCCAACTTCCTTAGGCCATGGGGATACCAAATCATATGGCCTATCTTTGAGACACCAGAGGCATTCTATCTCTTAG 1965 0.4071 MKFMKLGSKPDALQADGNSIRSVPVDAKNPNEVLVDPEKIYKGGIHAERRTRFPMIIRYVSSELATDVSVNVGDVKYHLHKFPLLSKSNRLQKLVSKANEENSDDDIYLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDVDRGNLVLKIEVFLNSSIFRCWKDSIIVLQTSKSLLPCSEDLKIIGRCIDSIASKTSVDPAYITWSYTYNRKLTEPDKIVEDKMTFLEKIESVPKDWWVEDICELDIDLYKRVLVAVKSKGRMDGVVIGEALKTYALRWIPDSVETLVSGANASRTKSVVETIVCLLPYDNGIGCSCSFLLKLLRVAILVGANESSAKELTKSISLKLHEACVKDLLIPARSLQITTYDVHLVQGLLNQYMNHEKGSCGMDVVQEKHGEDTYILGRRSLLTVGKLVDAYLGEIAHDPNLGLSSFVDLSQSIPDFARPDHDGLYRAIDVYLKEHPELTKAERKKLCGLMDVRKLTADASMHAAQNECLPLRVVVQVLFFDQVRSSISFQSLGNNSTRDPSPSPMNRDEGYKKTMGDSCQPIKNQMTHLRIKDEELHKNGKLGKKNSKNSKSGLQLLPSRSRRIFDKLWSVRKVQGENKSSETSGSSSSPTSLGHGDTKSYGLSLRHQRHSIS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00706 654 Gene3D Potassium Channel Kv1.1; Chain A 53 163 IPR011333 -
Spst9g00706 654 ProSiteProfiles NPH3 domain profile. 249 525 IPR027356 -
Spst9g00706 654 ProSiteProfiles BTB domain profile. 66 135 IPR000210 GO:0005515
Spst9g00706 654 Pfam NPH3 family 249 501 IPR027356 -
Spst9g00706 654 Pfam BTB/POZ domain 62 153 IPR000210 GO:0005515
Spst9g00706 654 PANTHER OS12G0117600 PROTEIN 61 609 IPR043454 -
Spst9g00706 654 MobiDBLite consensus disorder prediction 579 598 - -
Spst9g00706 654 SMART BTB_4 66 165 IPR000210 GO:0005515
Spst9g00706 654 CDD BTB_POZ_NPY3-like 58 162 - -
Spst9g00706 654 MobiDBLite consensus disorder prediction 616 639 - -
Spst9g00706 654 MobiDBLite consensus disorder prediction 531 561 - -
Spst9g00706 654 SUPERFAMILY POZ domain 58 154 IPR011333 -
Spst9g00706 654 MobiDBLite consensus disorder prediction 616 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00706 Spst-Chr9 6027957 6032069 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00706 59 524 EF-hand Containing Proteins AT3G44820 34.531 6.19e-93 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00706 - - gmx:100784205 1030.39