Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00696 ATGGCGTTGGTGAATCCCTTTCTGTGTCCCACTCGAACTTCCCTCCCTTTGCGCGTTCCCGCGCCGCCAAAGAAGGTCCCACGTTGGACTCTCTGCTCCCCCTCCTTCAAACCATCGTTAAGATTGAAGCACGCTACATGTGGCGCCACTGCAGGCATCCAAGCTGCACCTTTAGCTGACGGGGAAGCAGATCGCGCGGTTCTGGTGGGTCCCACCAGCGAGGAGGAGAGAAGAGCTGAGTATGACTGGACAGAGGAATGGTACCCTTTGTATCTCACTCAGAATGTGCCCGAAGATGCACCCTTGGGTCTCAAAGTGTATGATAAACAACTTGTGTTGTTCAAGGATGGCAATGGCCAGTTACGCTGTTACGAAGATCGCTGCCCCCACAGGTTAGCCAAACTATCAGAGGGACAGCTGGTTGATGGAAGGCTTGAGTGTTTGTACCATGGATGGCAATTTGAAGGGGAGGGCAAGTGTGTGAAGATACCTCAGCTTCCGGCTGATGCCAAAATTCCTAGGACGGCTTGTGTTAAAACATATGAAGTGAGGGACTCTCAAGGTGTTATTTGGGTGTGGATGTCCCTCAAGACACCTCCAAATGATAGTAAACTACCTTGGTTTGAGAACTTTGCAAGGCCGGGATTTCAAGATAATTCAACAACTCATGAACTACCTTATGATCACTCTATTCTTCTGGAGAACCTGATGGATCCTGCTCATGTCCCAATCTCACATGACAGAACGGATTGGACTGCAAAAAGGGAGGATGCTCAGCCGCTGTGTTTTGAGGTGACTGAACGAACTGATAGAGGGTTTGCAGGTTGGTGGGGCAAAGAAAAAGATGGGTCCAAGTCTAACTTCTTGCGATTTGAGGCTCCCTGTGTTCTACAAAATAACAAGGAATTTGTTGATAAGAATGGTGAAACACACTACTTCAGTGGCCTCTTCCTTTGTAGACCAACTGGGCAAGGAAAATCCATGCTGATAGTGAGGTTTGGAGGAACAAAATCATCTCCATTAGTGAAAGTGTTTCCCAAGTGGTACTTTCATCAGAACGCATGCAAGGTGTTTGAGCAAGACATGGGATTCTTATCATCTCAGAATGAAATTCTCTTGAAAGAGAAGGTTCCAACAAAACAACTATATCTGAATTTGAAATCATCAGACACATGGGTTGCAGAATACAGGAAGTGGATGGACAAAGTGGGGCATGGGATGCCATACCATTTTGGTCACAGCACTATCTCTTTGCCCAAAGAGCCTGCTGTGATTGAACATGCACCAGCTGGACTCGTTGCAGGACAATCAGCTTCCTCACCTACCAAGGGGGAGACTGGAACAAAGTATGCCCCAAATTTAGCCAACAGATATTTTAGGCATGTAATACATTGCAAAGGATGTAGAACCGTAGTCAAAGCTTTCCAAGCTTGGCAAAATGCCCTTTCAGCTGTGGCAGTTACCTTAGTCGCTTTGGCAATTCTGGTATCTGGGAGACAGTGGAAGGCCATTCTCTTGGCATCTGCTTCCCTGTGCTCTATTGGAGTCTATGCTTGCTCAACCGCCGTTGCAATTAACACTACAAACTTTGTTAGAACGCATAGAAGATTTTGA 1614 0.469 MALVNPFLCPTRTSLPLRVPAPPKKVPRWTLCSPSFKPSLRLKHATCGATAGIQAAPLADGEADRAVLVGPTSEEERRAEYDWTEEWYPLYLTQNVPEDAPLGLKVYDKQLVLFKDGNGQLRCYEDRCPHRLAKLSEGQLVDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRTACVKTYEVRDSQGVIWVWMSLKTPPNDSKLPWFENFARPGFQDNSTTHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGKEKDGSKSNFLRFEAPCVLQNNKEFVDKNGETHYFSGLFLCRPTGQGKSMLIVRFGGTKSSPLVKVFPKWYFHQNACKVFEQDMGFLSSQNEILLKEKVPTKQLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKEPAVIEHAPAGLVAGQSASSPTKGETGTKYAPNLANRYFRHVIHCKGCRTVVKAFQAWQNALSAVAVTLVALAILVSGRQWKAILLASASLCSIGVYACSTAVAINTTNFVRTHRRF 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00696 537 Pfam Rieske [2Fe-2S] domain 86 168 IPR017941 GO:0051537
Spst9g00696 537 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 65 485 - -
Spst9g00696 537 Gene3D - 82 211 IPR036922 GO:0051537
Spst9g00696 537 SUPERFAMILY ISP domain 76 200 IPR036922 GO:0051537
Spst9g00696 537 Gene3D - 214 405 - -
Spst9g00696 537 SUPERFAMILY Bet v1-like 188 406 - -
Spst9g00696 537 Pfam Pheophorbide a oxygenase 291 376 IPR013626 GO:0010277
Spst9g00696 537 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 87 192 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00696 Spst-Chr9 5966844 5969186 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00696 - - pvu:PHAVU_009G086000g 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00696 9 5966844 5969186 Spst9g00696 9 5966844 5969186 ECH