Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00682 ATGAATAACTCTTTGGTTGCAGCTGCACAAGTTGGGGACATAAACTTGCTCTACAAACTGATTCAGATGCAACCCTATGTGTTGGAGCACATAGACTTCATGCCATTTGTTGATACTCCTCTGCATGTTGCAGCTGCTGCAGGTCATGCCAGTTTCGCCACTGAGGTGATCAGGCTCAAACCCTCCTTTGCATGGAAGCTGAACCAGAGTGGTCTTAGCCCCATGCACCTTGCGTTGCAGAACATGCATTACAGAATGGTGTGTCGCTTTGTGGACATCAACAAGGACCTTGTGAGGGTCAAAGGGAGGGAGGGGCTCACTCCTTTGCATATTGCAACTCAAACTGGGAGAACTGATCTTGTGGCTATGTTCTTATCGGCTTGTCCAGGTTCCATTGAAGATGTAACTGTTCGTAGTGAGACCACGCTGCATATTGCTCTGAAATATAATCAGTTTCAGGCTTTGGAAGTCTTGGTTAGATGGCTTCAGAGAAACTGCCAAAGACAGGCTCGGGACCGGGAGAAAAGGATTCTGAACTGGCAGGATGAGGCCGGCAACACCATTCTCCACCTTTCTGTTCTCAAAGTCTTCCCTCAGGCAGTTAAGTTGTTGATAGATAGCAACATAGACATAAATGCAAAGAACTTTGAGGACTTGACAGCGTTGGACATGGTGGAGATTAACCAAACCGTGACTCACAGTCAAGAGATCAAAGACATGTTAGTGAGAGGTGGAGCTTTACGTGGCTTTTCACTTGCTACTACTCCTCTCCTCGAAGAAGAGCTAATAGAAAAAATCACATACAATGAGAGAATAGCAATCTTCGTAACTCGCCTGAGAAAGAGAATATCACACGACACACGCAACGCTTTGTTGGTGGTGACTATTCTTTTCGCAACAAGCACGTACGAAGCAGCACTTAACCCTCCCGGTGGAGTTTACCAAGGAGAGGGTAGGGTGACACCCTCTGAGAAAATTGCATCATTGAAGCACAGTGAGTATGCAGCAACGCGAGAAATTGCTGGGAAAGTGGTTATGAAAATGCAAACCTTCTTCTGGTTCTGGTCCTTCAATACATGCTCCTTTTATCTTTCGATTTTGATGATATGTTTGCTCATGCCACGAGGGCGAGTCAGTGTTATCGTGACCTTTCCACTTTCTTTATTCTCCGGGTGCTACGTGTTCTCCATGTTAGTGATATCACCCAGTTTCAAGTTAAACACTGTCACTGTGATTCTGCCATGCGTGTTTACAATATTGTACTGTTGGGGAAGTTCGATATACATTAGATTAGCCAAAAAACTTAAAATGTATGGTCATAAACAGAAAGACACGTTCAACAGATGGTAA 1350 0.4474 MNNSLVAAAQVGDINLLYKLIQMQPYVLEHIDFMPFVDTPLHVAAAAGHASFATEVIRLKPSFAWKLNQSGLSPMHLALQNMHYRMVCRFVDINKDLVRVKGREGLTPLHIATQTGRTDLVAMFLSACPGSIEDVTVRSETTLHIALKYNQFQALEVLVRWLQRNCQRQARDREKRILNWQDEAGNTILHLSVLKVFPQAVKLLIDSNIDINAKNFEDLTALDMVEINQTVTHSQEIKDMLVRGGALRGFSLATTPLLEEELIEKITYNERIAIFVTRLRKRISHDTRNALLVVTILFATSTYEAALNPPGGVYQGEGRVTPSEKIASLKHSEYAATREIAGKVVMKMQTFFWFWSFNTCSFYLSILMICLLMPRGRVSVIVTFPLSLFSGCYVFSMLVISPSFKLNTVTVILPCVFTILYCWGSSIYIRLAKKLKMYGHKQKDTFNRW 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00682 449 ProSiteProfiles Ankyrin repeat profile. 104 126 IPR002110 GO:0005515
Spst9g00682 449 Gene3D - 1 237 IPR036770 -
Spst9g00682 449 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Spst9g00682 449 Pfam Ankyrin repeats (3 copies) 94 159 IPR002110 GO:0005515
Spst9g00682 449 SUPERFAMILY Ankyrin repeat 5 238 IPR036770 -
Spst9g00682 449 PANTHER HOMEOBOX PROTEIN WARIAI 11 403 - -
Spst9g00682 449 Pfam Ankyrin repeats (many copies) 177 224 IPR002110 GO:0005515
Spst9g00682 449 SMART ANK_2a 70 99 IPR002110 GO:0005515
Spst9g00682 449 SMART ANK_2a 36 65 IPR002110 GO:0005515
Spst9g00682 449 SMART ANK_2a 184 213 IPR002110 GO:0005515
Spst9g00682 449 SMART ANK_2a 104 134 IPR002110 GO:0005515
Spst9g00682 449 PRINTS Ankyrin repeat signature 200 214 IPR002110 GO:0005515
Spst9g00682 449 PRINTS Ankyrin repeat signature 105 120 IPR002110 GO:0005515
Spst9g00682 449 ProSiteProfiles Ankyrin repeat region circular profile. 104 126 - -
Spst9g00682 449 ProSiteProfiles Ankyrin repeat region circular profile. 184 215 - -
Spst9g00682 449 Pfam Domain of unknown function 285 404 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00682 Spst-Chr9 5908490 5910199 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00682 4 428 Miscellaneous Gene Families AT5G15500 38.051 4.45e-90 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00682 - - gmx:100790227 729.939