Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00677 ATGGAATGTAATAATGATCAGTGTGGCGGCCAAAGTGTTGTAAGCTTGAAGAGAAAGTCGCCAGGAGATGGAGAGCATGCAATCTTCAACACCACTTCTCTTGATGACCTTAATGAAGATCTATTTGAAAGGATACTTTCATGGCTTCCAACTTCCACATTCTTTCGCCTAAGTTCTGTGTGCAAAAGATGGAAATCAGTTGCTGATTCTGCCAGTTTCAAGCTTGCCTGCTCTCACGTTCCCTCCAGGGATCCTTGGTTTTTAATGGTTGCTCCCAACGTTAATCAATCTGTTATCTTTGACTCTGCTGAGCGCTCTTGGAAGAAACTAAACCACCCACCACTTCTGCAAGAGGAGTCTAACCAAAATTGCGTGCCAGTTGCAGCCTCTGGAGGCTTGATTTGCCACAGAAAATTATCAGGAAACTTCATTGTGAGCAACCCCGTGACAGGATCCTGTACAGAACTCCCTCCACTGCATGCCCCACAACAACCTCTCAATGCCATTGTCATGAACACAGCTTGCAAAGACCAACTCTCCTTCAAAATTGTCTTGGTATTTGGTGAACTTCCAAATCTCTTGTTTAAAGTCTACCATTCAAGGTCTGGCTGTTGGGATGATCAGACTGCTTTGAGGAGAAAGACTGAAGACAATTCAATGGAACATGATTCCACTGATGACAATGTTGTGTACTTCCTCAGCAAGGCTGGAATTGTTGTGGCAAGCAACATGCAGAGAAGCCCGTCTAAACAATACTCGTCAGTTATTACCAACAAAGATGGCCAAGAGATTGTGTATTTTCTCAACTCCTCAGGGAATGTAGTAGGTTGCAATTTGACATGCAAGTGCTTCTTTGAGTACCCCAGGTTGTTGCCTGTTTTTAGTGAGTATTCCATTGATGTTGTGGAGTGCAATGGGGAGATGCTAGTTGTTTTGTTATCAGAATTCTTGGAAACTGCAACTATTAGGATATGGAGGTATGATGAAGCTAATAAAGGGTGGCATCAGATTGCGGCAATGCCTGCAGCAAATTCTCATGAGTGGTATGGAAAGAAAGCAGATATTAACTGTGTTGGGGCTGGTAACCAAATATTGATATGCTTGAGCTCCCCTGAGCTATGCACTTATGTTCTGTGTGATTTGGAAACCAACAAGTGGGTTGAATTGCCAAAATGTTGCATAAATGGAGAAGTCATAGACTTTATGTCTGCCTTTTCATTTGAACCTCGGATAGAGGCTTCTGTGTGA 1248 0.4303 MECNNDQCGGQSVVSLKRKSPGDGEHAIFNTTSLDDLNEDLFERILSWLPTSTFFRLSSVCKRWKSVADSASFKLACSHVPSRDPWFLMVAPNVNQSVIFDSAERSWKKLNHPPLLQEESNQNCVPVAASGGLICHRKLSGNFIVSNPVTGSCTELPPLHAPQQPLNAIVMNTACKDQLSFKIVLVFGELPNLLFKVYHSRSGCWDDQTALRRKTEDNSMEHDSTDDNVVYFLSKAGIVVASNMQRSPSKQYSSVITNKDGQEIVYFLNSSGNVVGCNLTCKCFFEYPRLLPVFSEYSIDVVECNGEMLVVLLSEFLETATIRIWRYDEANKGWHQIAAMPAANSHEWYGKKADINCVGAGNQILICLSSPELCTYVLCDLETNKWVELPKCCINGEVIDFMSAFSFEPRIEASV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00677 415 PANTHER BNACNNG10540D PROTEIN 31 414 - -
Spst9g00677 415 MobiDBLite consensus disorder prediction 1 21 - -
Spst9g00677 415 CDD F-box_AtFBW1-like 35 73 - -
Spst9g00677 415 Pfam F-box domain 34 73 IPR001810 GO:0005515
Spst9g00677 415 ProSiteProfiles F-box domain profile. 31 76 IPR001810 GO:0005515
Spst9g00677 415 SUPERFAMILY F-box domain 30 90 IPR036047 GO:0005515
Spst9g00677 415 SMART fbox_2 37 77 IPR001810 GO:0005515
Spst9g00677 415 Gene3D - 28 74 - -
Spst9g00677 415 SUPERFAMILY Galactose oxidase, central domain 97 392 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00677 Spst-Chr9 5886402 5887649 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00677 - - gmx:100786481 735.717