Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00673 ATGATTTCCAAAATGAATTGGGACGAGAACGATGAATTTGAGATCCCTCTTACACAAACGGCAACGGCTTTTCACGCGCTCGAGTCCGTCGATAAGAATCAACGGCCATTAAAGAAACCTAAATGCAAATCGACGGCGCTTCGTGGCAATGGTAGTGGCAAGGAGAACGTCCAACCCAGCGAGGATTGCGAAATTGAGAACTGCAACTTGGATTTTATTCCTTCCTCCATAGATTGTGTTTCGATTTGCAGCGTTCAACATTCAGAACAAGAGGACAGTGATTCTTCTTCCGCGTCTTTGTCGGAGCTGAAATCAAAGGGGGATTATCTTCGCAACTCCGTAGAATCAAAGCTGGTGGTTTCAAGAACCGGAGCGCTTAACGCTGCAGATGCAGATTCTGATACGGAGCTTGGTCTGTTGATGAATTTGTGCGATGAGTTGGAGGAAGTGGATAGTTCCGTTCGGTGTCCCCTGTGTTATGTTGATATTTCGAATATGACCGAGGAACAGCGACATCTTCATACCAATAATTGTCTAGACGAAGGAGACAACGTTGCGGTTCTTGAAGACGAGAAGGGTGCTCAACATGCGCCAAAAGTTGCTTCTGTTGTTGATTGGCTTCACGGGCTCGGTTTGGGAAAATATGAAGTTCTTTTCATCAGGGAAGAAGTTGATTGGGACACCTTACAATGGCTCACAGAAGAGGATCTCTTAAGCATGGGTATCACTGCGCTTGGGCCCAGAAAAAAGATTTTGCATGCCCTGTGTGAACTGAGAAAAGGAGATGCCGCTAAAAATGAGAAACATGGGGATGCTTTGGCGGAGCCTGGAATGATTAGAAACCAGAAAGTCAAATTAAAGCATGACAAATCTGACAGAAAAGTTTATGGCGCTAGTAAACCAGCGGCAAACAAATTAATTACTGAGTATTTTCCGGGGTTTGCTTCCAAAGAAAAGAAAGTTTCTGCCTCTCCTGGAGTACAAAAGGAAATGAGAAACGGTGGCTTGGATACTAGTTGTAAGCACAAATCAAAAAGTGTTACAACAAATAGAAAGCTCCGTAATATTCCCAAATGGTGTTTTGTACAAGGAACGCCTTTCCGAGTGGACTCTGGAAGTATCTTAGCCAGAAGGAAAGATGCTTTCAAATATCTCAGAGGAGATTGTTCCCACTGGTTCCTCACACATTTCCACTTGGACCATTATCAAGGTCTCACCAAGTCATTTAATCATGGAAAGATTTACTGCTCCTCCATTACAGCTAGGCTTGTAAATATGAACATTGGAATTCCATATGATAAATTACATGTTTTGCCTCTGAACCAAAAGGTTGAAGTAGCTGGTGTTGATGTGACTTGCTTTGATGCCAACCATTGTCCAGGTTCCATACTCATACTCTTTCAACCTCCGAATGGTAAGGTTGTGCTTCACACGGGTGATTTCCGGTTTAGTGAAGAAATGACAATCAATCCTTTATTGCAGACTTGTCCTATCGATACTCTAATTCTTGATACAACATACTGCAATCCACAGTATGAATTTCCAAAACAAGAGGCTGTAATACAATTCGTTATTGATGCCATTCAAGCAGAAACTTTTAATCCCAAAACTCTTTTTCTGATCGGCAGCTATACAATTGGTAGAGATCAATGGGACTTTCTTTGTGTTCGGGTAGAGTTGTATTTCTGTGGAAAAGAAAGGTTATTCTTGGAGGTTGCTCGTTCGCTTCGTAAAAAGGTTCACGTGACTGCGGCAAAGTTACGTCTTTTAAAATGTTTGGAATTTAAGGAAGAGGATATGCAGTGGTTCACTTCAAACGAACATGAAAGCAACATTCATGTTGCCCCTATGTGGACGCTCGCAAGCTTCAAAAGATTGAAGCACATATCAAATCAATATAAGTTGCTTTCTCCCCTACTGGTTGGACGTTTGGCAAAGGTAAAAAGAAGTCTACTGGAAGAAGATGGCAAAAGGGATGTTTATATGATCAAACTTGATGAATTTGTTGAAAATGACTAA 2019 0.418 MISKMNWDENDEFEIPLTQTATAFHALESVDKNQRPLKKPKCKSTALRGNGSGKENVQPSEDCEIENCNLDFIPSSIDCVSICSVQHSEQEDSDSSSASLSELKSKGDYLRNSVESKLVVSRTGALNAADADSDTELGLLMNLCDELEEVDSSVRCPLCYVDISNMTEEQRHLHTNNCLDEGDNVAVLEDEKGAQHAPKVASVVDWLHGLGLGKYEVLFIREEVDWDTLQWLTEEDLLSMGITALGPRKKILHALCELRKGDAAKNEKHGDALAEPGMIRNQKVKLKHDKSDRKVYGASKPAANKLITEYFPGFASKEKKVSASPGVQKEMRNGGLDTSCKHKSKSVTTNRKLRNIPKWCFVQGTPFRVDSGSILARRKDAFKYLRGDCSHWFLTHFHLDHYQGLTKSFNHGKIYCSSITARLVNMNIGIPYDKLHVLPLNQKVEVAGVDVTCFDANHCPGSILILFQPPNGKVVLHTGDFRFSEEMTINPLLQTCPIDTLILDTTYCNPQYEFPKQEAVIQFVIDAIQAETFNPKTLFLIGSYTIGRDQWDFLCVRVELYFCGKERLFLEVARSLRKKVHVTAAKLRLLKCLEFKEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISNQYKLLSPLLVGRLAKVKRSLLEEDGKRDVYMIKLDEFVEND 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00673 672 SUPERFAMILY SAM/Pointed domain 199 260 IPR013761 -
Spst9g00673 672 CDD SNM1A-1C-like_MBL-fold 344 510 - -
Spst9g00673 672 Pfam Beta-lactamase superfamily domain 393 512 IPR001279 -
Spst9g00673 672 SUPERFAMILY Metallo-hydrolase/oxidoreductase 369 551 IPR036866 -
Spst9g00673 672 SMART Lactamase_B_5a 357 528 IPR001279 -
Spst9g00673 672 MobiDBLite consensus disorder prediction 35 59 - -
Spst9g00673 672 FunFam DNA ligase 6 363 532 - -
Spst9g00673 672 Gene3D - 380 512 IPR036866 -
Spst9g00673 672 CDD SAM_superfamily 202 255 - -
Spst9g00673 672 Pfam SAM domain (Sterile alpha motif) 199 257 IPR001660 GO:0005515
Spst9g00673 672 Gene3D - 189 264 IPR013761 -
Spst9g00673 672 ProSiteProfiles SAM domain profile. 198 261 IPR001660 GO:0005515
Spst9g00673 672 SMART SAM_4 195 261 IPR001660 GO:0005515
Spst9g00673 672 Gene3D - 513 550 - -
Spst9g00673 672 Gene3D - 556 639 - -
Spst9g00673 672 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 558 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00673 Spst-Chr9 5841617 5850226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00673 201 255 Glycosyltransferase AT3G07170 50.909 7.58e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00673 K15340 - gmx:100816321 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00673 9 5841617 5850226 Spst9g00673 9 5841617 5850226 ECH