Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00672 ATGGCAACGGAAAACAAGTGGTGCGTGGTGACCGGAGGCAGGGGTTTCGCCGCTCGGCATTTGGTGGAAATGCTAATCCGGCTCAACGAATACTGCGTTCGCATCGCCGATTTGGGAGACAGCATTGTTCTCGAGCCCGCCGAACAGTTGGGGCTTCTCGGCCAGGCCTTGGACTCTGGCCGGGTCCAATACGTCTCCCTCGATCTTCGCGACAAGGCCCAAGTCCTGAAAGCATTGGAAGGAGTTGAGGTTGTATTCCACATGGCTGCTCCGAACTCTTCAATCAACAATTACCAGCTTCATTATTCCGTCAATGTGCAAGGGACTAAGAATGTCATAGATGCTTGCGTGGAGCAGAAAGTGAAGCGACTGGTCTACACCAGCTCCCCCAGCGTGGTCTTTGATGGCATTCATGGGATTCATAATGCGGACGAAACAATACCTTATACACATTTGCCTAATGATCATTACTCAGCTACGAAAGCTGAGGGTGAGACATTGATCATTAAAGCTAATGGGACTAATGGCCTCCTAACATGCTGCATACGCCCTAGCAGCATTTTTGGGCCCGGTGATAGACTATTGGTGCCTACACTAGTTGATGCTGCCAGGAAAGGGAAATCCAAGTTCCTTATTGGCAATGGCAACAATGTTTGTGATTTCACATATGTTGAAAATGTGGCACATGCTCATATATGTGCTGATCGTGCTCTAGCTTCAGAAGGACCAGTTTCAGAAAAAGCTGCAGGAGAGGCATATTTCATAACAAATACGGAGCCTATGAAATTTTGGGAGTTTGTGTCAGTGGTATTGGATGGTCTTGGATATGAAAGGCCAAGAATAAAGATCCCTGTTGTTGTTATCTTGCCCATTGCACATTTCGTGGAGTGGATATATAGGCTGCTAGGCCCATATGGGATGAAAGTGCCTCAGTTAACCCCTTCAAGAGTAAGACTCACATCCTGCAGCAGAACTTTTGATTGCTCAAAAGCAAAGGATTGCCTTGGCTATGCACCCATCGTAACACTACAGGAGGGCCTGCGGAGGACAATTGAATCATATGCACACTTGAAGGCAGGAAATCAACCTAAAACTAAAAGAGAAGGTCCCTCGAAAGCTTCCAAATATCTTGGAAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAAAAAGCAAACTTTCATCGCATTGTTAGTCTTGAGTGCAATATACTTCAACTTCATTGCATCTGAAAATACCATCATTAGTGCTTTGACAAAGCTGCTATTGTTCGCATCGATCTTTTTATTCATTCATGGCATTCTACCTGCAAAAATGTTGGGGTATACTGTTGAGAAAATGCCCAAATCATGGTTTCATTTATCAGAAGATAGGTCACATAAAATTGCTCTCTCAGTGGCCTCATCATGGAATATTGCTGTGAATGTTTTGAAATCCCTCGCAGAAGGAAATGATTGGGTGCTGTTGTTAAAGGTTGTTCTCTCTCTGTTCATTTTTAGCTTCCTTGGAGCCTTTTCACTTCAGAACTTGTATACTATAGGAGTTACCTTTGCGTTTATAGCGTTCTACGTATACGAACAGAAGGAGGAAGACATTGATGGGATATTTATAAAAACACATTCTTTTAGTTGCAAATTGAAATCTGATCTCACCAAAAAGTTTCTTTCCTCAAAGAAGAGTGATTGA 1689 0.4375 MATENKWCVVTGGRGFAARHLVEMLIRLNEYCVRIADLGDSIVLEPAEQLGLLGQALDSGRVQYVSLDLRDKAQVLKALEGVEVVFHMAAPNSSINNYQLHYSVNVQGTKNVIDACVEQKVKRLVYTSSPSVVFDGIHGIHNADETIPYTHLPNDHYSATKAEGETLIIKANGTNGLLTCCIRPSSIFGPGDRLLVPTLVDAARKGKSKFLIGNGNNVCDFTYVENVAHAHICADRALASEGPVSEKAAGEAYFITNTEPMKFWEFVSVVLDGLGYERPRIKIPVVVILPIAHFVEWIYRLLGPYGMKVPQLTPSRVRLTSCSRTFDCSKAKDCLGYAPIVTLQEGLRRTIESYAHLKAGNQPKTKREGPSKASKYLGSGRVADTLLWKDKKQTFIALLVLSAIYFNFIASENTIISALTKLLLFASIFLFIHGILPAKMLGYTVEKMPKSWFHLSEDRSHKIALSVASSWNIAVNVLKSLAEGNDWVLLLKVVLSLFIFSFLGAFSLQNLYTIGVTFAFIAFYVYEQKEEDIDGIFIKTHSFSCKLKSDLTKKFLSSKKSD 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00672 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 356 IPR036291 -
Spst9g00672 562 FunFam Reticulon-like protein 1 359 - -
Spst9g00672 562 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 8 355 - -
Spst9g00672 562 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 284 IPR002225 GO:0003854|GO:0006694|GO:0016616
Spst9g00672 562 ProSiteProfiles Reticulon domain profile. 382 562 IPR003388 -
Spst9g00672 562 Pfam Reticulon 382 537 IPR003388 -
Spst9g00672 562 Gene3D - 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00672 Spst-Chr9 5836203 5841352 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00672 2 358 Lipid Metabolism Gene Families AT2G33630 32.979 4.34e-45 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00672 K23558 - gmx:100816854 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00672 9 5836203 5841352 Spst9g00672 9 5836203 5841352 ECH