Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00660 ATGAGGTTGAAGGAGTGGGAAACTGAAGTTGGAAGTGGGAAGGGCATATTCCACCTCCACATCTCTGCAAAAGAGACCCTTTTGCTTCTTTTCAGGGTGGTTTTTGGCTCAGGAGATCTCTGTGTTGAGGTTCCATATGCAGATCGAGATGCGAAAATATTCTCCTTTTTTCTCCACTTTTTGTGTAGTTTTTTAACAGTTGATTTTCTGTACCATCTTCGACTATATTCTCTTTCTGGTGAAAACTTTGATGATGGGTTGATTGTACCCTGCATGCTGCTTTGCTTTTTCACGAAATTGCAATTCTTTGTAACAGTCATGGATCTGTTGTGTGGGCCGGACACTAGTCTAGCTAAAGCGATTATTCAGAGTTTGTTTCAACCTACTCCTGCTATCCAGCTGTGCCTGTGCCCTCGAGGCTTCTTCTTGGTTACAGAAAATATGGGTTTAGTCTGCAGCAGAAGTCGACGTTTTCGTGATGCTGATGCTGAAGAAAATGCTCAGGACGCCGAAATTGAAAGAAGAATCGAGTTAGAAACTAAGGCTGAAAAGCATATTCAGAAACTTCTGCTATTAGGATCTGGAGAGTCTGGGAAGTCTACAATCTTTAAGCAGATAAAACTTTTGTTTCAAACTGGCTTTGACGAGGCTGAGCTAAAAAGCTACATACCAGTCATTCATGCTAATGTGTATCAGACAATAAAAGTACTGCATGATGGGTCAAAAGAGTTGGCGCAGAATGACGCTGATTCTTCGAAGTACGTGATATCTAATGAAAACCAGGACATTGGTGACAAGCTCTCAGAAATAGGAGGCCGGCTAGATTACCCCCGTCTTACCAAGGAGCTTGCACAGGAAATAGAGACTCTGTGGGAGGATGCTGCAATTCAGGAAACATATGCCCGTGCTAATGAACTCCAAGTTCCAGATTGTACCCATTATTTCATGGAAAATTTGGAGAGGTTGTCTGATGCAAATTATGTTCCAACGAAGGAGGATGTTTTGTATGCAAGAGTTCGTACAACTGGTGTTGTTGAGATCCAATTCAGTCCTGTTGGAGAAAACAAGAGAAGTGGTGAAGTCTATAGACTCTTTGATGTTGGTGGCCAGAGAAATGAGAGGAGAAAATGGATCCATCTTTTCGAAGGAGTTACAGCTGTAATATTCTGTGCTGCAATTAGCGAGTACGATCAAACACTGTATGAGGATGAAAACAAGAACAGAATGATGGAGACTAAGGAACTTTTTGAGTGGGTCCTGAAGCAACCGTGTTTTGAGAAAACATCCTTCATGTTATTTTTAAACAAGTTTGACATATTTGAAAAGAAGATCCTGAAAGTTCCGCTCAATGTATGTGAGTGGTTCAAAGATTACCAGCCAATTTCAACAGGGAAGCAAGAGATTGAACATGCGTACGAGTTTGTGAAGAAGAAGTTCGAGGAATTGTATTTCCAGAGCACTGCTCCTGACCGCGTAGATCGCGTCTTCAAGATCTACCGGACCACTGCCCTTGATCAGAAGCTTGTGAAGAAGACATTCAAGCTTGTTGATGAGACTTTGAGACGGAGGAATCTCTTTGAAGCTGGTTTATTATGA 1596 0.4185 MRLKEWETEVGSGKGIFHLHISAKETLLLLFRVVFGSGDLCVEVPYADRDAKIFSFFLHFLCSFLTVDFLYHLRLYSLSGENFDDGLIVPCMLLCFFTKLQFFVTVMDLLCGPDTSLAKAIIQSLFQPTPAIQLCLCPRGFFLVTENMGLVCSRSRRFRDADAEENAQDAEIERRIELETKAEKHIQKLLLLGSGESGKSTIFKQIKLLFQTGFDEAELKSYIPVIHANVYQTIKVLHDGSKELAQNDADSSKYVISNENQDIGDKLSEIGGRLDYPRLTKELAQEIETLWEDAAIQETYARANELQVPDCTHYFMENLERLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKRSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQTLYEDENKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPISTGKQEIEHAYEFVKKKFEELYFQSTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDETLRRRNLFEAGLL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00660 531 Gene3D - 188 519 IPR027417 -
Spst9g00660 531 SUPERFAMILY Transducin (alpha subunit), insertion domain 214 339 IPR011025 GO:0007165
Spst9g00660 531 PRINTS Plant G protein alpha subunit signature 263 277 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Spst9g00660 531 PRINTS Plant G protein alpha subunit signature 483 495 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Spst9g00660 531 PRINTS Plant G protein alpha subunit signature 224 237 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Spst9g00660 531 PRINTS Plant G protein alpha subunit signature 239 253 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Spst9g00660 531 PRINTS Plant G protein alpha subunit signature 466 481 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Spst9g00660 531 PRINTS Plant G protein alpha subunit signature 174 183 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Spst9g00660 531 PRINTS Plant G protein alpha subunit signature 347 362 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Spst9g00660 531 PRINTS Plant G protein alpha subunit signature 417 428 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Spst9g00660 531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 528 IPR027417 -
Spst9g00660 531 CDD G-alpha 187 525 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst9g00660 531 SMART galpha_1 166 530 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst9g00660 531 FunFam Guanine nucleotide-binding protein alpha-1 subunit 325 518 - -
Spst9g00660 531 Gene3D - 215 340 IPR011025 GO:0007165
Spst9g00660 531 FunFam Guanine nucleotide-binding protein alpha-1 subunit 215 340 - -
Spst9g00660 531 ProSiteProfiles G-alpha domain profile. 185 531 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst9g00660 531 PRINTS Alpha G protein (transducin) signature 362 379 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst9g00660 531 PRINTS Alpha G protein (transducin) signature 384 412 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst9g00660 531 PRINTS Alpha G protein (transducin) signature 188 203 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst9g00660 531 PRINTS Alpha G protein (transducin) signature 327 349 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst9g00660 531 PRINTS Alpha G protein (transducin) signature 430 439 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst9g00660 531 Pfam G-protein alpha subunit 169 519 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Spst9g00660 531 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 162 527 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00660 Spst-Chr9 5752728 5759085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00660 K19729 - gmx:547804 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00660 9 5752728 5759085 Spst9g00660 9 5752728 5759085 ECH