Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00659 ATGATGCATGTTAATGGCGGTTTAAATTACAAGGAGGCTCTCACCAAGTCCCTTATCTTCCTTGAGGCACAACGTTCAGGGAAGCTCCCCGAAGATAACAGGGTGCCTTGGAGAGGAGACTCAGCACTCGACGATGGAAAACTCGTTCATGTGGACCTGGTCGGGGGATACTATGATGCAGGGGACAACGTGAAATATGGTCTCCCCATGGCTTTCACCGTTACTACGCTAGCATGGGCTGCTATTTTTTACAGGTCAGAATTTAAAGAAGCAGAAGAGTTGAATAATCTTCGCGATGCCATTCGTTGGGGTACCGATTATTTTCTCAAAGCTAGTTCTCGACAAAAAAGATTATACGTGGAGGTAGGGGACGCGGAAGAGGATCACAATTGTTGGCTTCCACCAGAACATATGAAGACAAAGAGAACGGTTAAGATGATTGGTGATGGCACACCCGGGAGTGAAATTGCAGCTGAAACTGCAGCTGCAATGGCTGCTTCTTCCATTCTTTTCCAAATGGCCAAATCGCATAAAGGAACCTATGATGGAGAGTGTCCCTTCTACTGCTCTTATTCCGGCTATAATGACGAACTGATGTGGGCAGCAACATGGCTATTCATGGCTACGAGGAAATCAACGTATTTGAAGTACATACTAGAAGAATCCATAAGTGCTAGTGTAGCAGAATTTAGTTGGGACCTTAAATATGCTGGAGCTCAAGTCCTTCTTAGCCAGTTATATTTCCAAGGTGAAGAGAGGTTCCAAATATTCAGAAACCATGCCGAAAGTTTCATATGCTCTGTCCTCCCTGATAGTCCTTACCACCAGATTACAATGTCTCCTGGAGGCTATATTCATTTAAGAGACGGAGCAAACTCGCAGTATGCCACGAGCAGTGCTTTCTTGTTTTGTGTATATAGTGATTTGCTTGCCAAGTATAACTCGAAAGTCGTTTGTGGAGACAAGAAATTTAGCTCTTCCCATCTTCTTGATTTTGCTAAGAAACAAATGGATTACCTTCTTGGGAAAAACCCTGAAGGAAGATCGTACATGGTAGGATTTGGAAAGAACCCACCAACGCAAGCTCACCACAGAGGTGCTTCGGTGCCTAAACTGGAAAAGGGTGTAGAGCTGTCTTGTGGCGAGAGCTTCTCAAAATGGCTCAATAGAGATGAACCTAACCCCCATGAACTGACTGGTGCCATTATGGGTGGACCTGACCGCATGGACAAGTTCAAGGATAAACGTTGGGAGTCACCCTACACTGAGCCATGCACCTACGTCAATTCTCTAGCTGCTGGAGTTCTGGCTAAGCTTGCATCTTTGCATTGA 1332 0.452 MMHVNGGLNYKEALTKSLIFLEAQRSGKLPEDNRVPWRGDSALDDGKLVHVDLVGGYYDAGDNVKYGLPMAFTVTTLAWAAIFYRSEFKEAEELNNLRDAIRWGTDYFLKASSRQKRLYVEVGDAEEDHNCWLPPEHMKTKRTVKMIGDGTPGSEIAAETAAAMAASSILFQMAKSHKGTYDGECPFYCSYSGYNDELMWAATWLFMATRKSTYLKYILEESISASVAEFSWDLKYAGAQVLLSQLYFQGEERFQIFRNHAESFICSVLPDSPYHQITMSPGGYIHLRDGANSQYATSSAFLFCVYSDLLAKYNSKVVCGDKKFSSSHLLDFAKKQMDYLLGKNPEGRSYMVGFGKNPPTQAHHRGASVPKLEKGVELSCGESFSKWLNRDEPNPHELTGAIMGGPDRMDKFKDKRWESPYTEPCTYVNSLAAGVLAKLASLH 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00659 443 PANTHER ENDO-1,4-BETA-GLUCANASE 9 441 - -
Spst9g00659 443 SUPERFAMILY Six-hairpin glycosidases 9 441 IPR008928 GO:0005975
Spst9g00659 443 Pfam Glycosyl hydrolase family 9 10 436 IPR001701 GO:0004553|GO:0005975
Spst9g00659 443 Gene3D - 5 443 IPR012341 GO:0005975
Spst9g00659 443 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 339 365 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00659 Spst-Chr9 5749200 5751494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00659 1 441 Glycoside Hydrolase AT3G43860 66.377 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00659 K01179 - gmx:100811509 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00659 9 5749200 5751494 Spst9g00659 9 5749200 5751494 ECH