Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00646 ATGCTAGCTTATTTGGAACACTTCGTTCGCGAAAACGACGCTGAATCGAGGCAGGACGACGACGTTGCGAGCCTCGCCAGAGCGCTTGAACTTCAAGCCAGCATCGACCAATTCGGTCCCACCGGGATCGCCACCAAGGATTTCGGCGGCATCAAGTCCGCGAAACCCTTGGCCCTGGTCAGGCCATCCTCCACCGTCGACGTGGCCAGAGTGGTGAAAGCCGCGGCGGCGTCGCCGAGTCTGACGGTGGCGGCGCGCGGGAACGGGCACTCCGTGAACGGGCAGGCTATGGCGGAACAGGGACTGGTCCTCGATATGCGCGCCTTGGAAGAGCCTTTTAAGATTCTCTGGATAGAGGGCGCGGCCTACGTGGACGTTTCCGGAGGGGCATTATGGGAAGACGTCCTTAAACGATGCGTTTCGGAGGTTGGACTCGCCCCGAGGTCGTGGACGGATTATCTCGGTTTAACGGTTGGTGGAACGCTGTCGTACGCTGGCGTCAGCGGGCAAACCTTCCGTTACGGTCCTCAGACATCCAACGTAACGGAATTGGAAGTTGTAACTGGCAAAGGCGAAACGCTGTGCTGCTCCCAGACACAAAACTCCGAACTTTTCTTTGGCGCGCTTGGTGGCTTAGGACAGTTCGGTATTATTACAAGGGCCAGGGTGGTTCTTCAACAAGCTCCAGATATGGTGAGGTGGATAAGAGTGGTTTACTCTGAATTTGAGGAGTACGCTGGCGACGCAGAGTCGCTGGTGGAGGAATTAGAGGAATGTTTTGATTATGTGGAAGGGTTCGTTCTGGTGAACAGTGATGACCGGGCCAATGGATGGCCCACCGTGCCATTGGGCCCGGAACAAGTGTTCGACCCGATTCATATTCCTTCCAGTGCTGGCCCTGTTTTGTATTGCTTGGAGCTGGCGCTTCACTATCGTAACGCCGATCATCTTTCCCGTGTCGATACGGATGTGGATCGATTGCTCCAACGCCTACGATTCATTCGAGGTCTCAACTTCCAGATGGATGTCACCTACATGGAGTTTTTGCTCCGTGTAAAGCGTGTGGAGGAGCACGCAAAAGCCAGCGGCACCTGGGATTCACCTCACCCTTGGCTCAATCTGTTTCTGTCCAAGTCCAACATCCTTGATTTTGACCGTGAGGTGTTCAAGAAGATTCTCAAGCACGGGGTCGATGGCCCCATTTTAGTCTACCCGCTCTTGCGAAACAAGTGGGATGATCGTCACTCAGTGGTGGTGCCTGACAGTGAAATCTTCTACATAGTAGCCTTGCTTCGATTCAGTCCAGCACCCCCAAAGGGTCCACCAGTTGAAGTATTATTGGAACAAAACAATGAGATTATTCAGTTCTGCACGAACAGAGGCCTTGATTTCAAGCTATACTTTCCTCACTACCAGTCAAGGGAGGATTGGAGGAAACACTTTGGAAAACAATGGGCCAGATTTGTGGAACGAAAGGCCAATTTTGATCCCATGGCTATCCTTGCCCCAGGACAGGCAATTTTCCCCAGAACCTCTCAACCTCCTTCTATCATATAA 1557 0.5305 MLAYLEHFVRENDAESRQDDDVASLARALELQASIDQFGPTGIATKDFGGIKSAKPLALVRPSSTVDVARVVKAAAASPSLTVAARGNGHSVNGQAMAEQGLVLDMRALEEPFKILWIEGAAYVDVSGGALWEDVLKRCVSEVGLAPRSWTDYLGLTVGGTLSYAGVSGQTFRYGPQTSNVTELEVVTGKGETLCCSQTQNSELFFGALGGLGQFGIITRARVVLQQAPDMVRWIRVVYSEFEEYAGDAESLVEELEECFDYVEGFVLVNSDDRANGWPTVPLGPEQVFDPIHIPSSAGPVLYCLELALHYRNADHLSRVDTDVDRLLQRLRFIRGLNFQMDVTYMEFLLRVKRVEEHAKASGTWDSPHPWLNLFLSKSNILDFDREVFKKILKHGVDGPILVYPLLRNKWDDRHSVVVPDSEIFYIVALLRFSPAPPKGPPVEVLLEQNNEIIQFCTNRGLDFKLYFPHYQSREDWRKHFGKQWARFVERKANFDPMAILAPGQAIFPRTSQPPSII 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00646 518 Gene3D - 232 467 IPR016170 -
Spst9g00646 518 Gene3D - 106 230 IPR016169 -
Spst9g00646 518 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 229 508 IPR015345 GO:0009690|GO:0019139|GO:0050660
Spst9g00646 518 SUPERFAMILY FAD-linked oxidases, C-terminal domain 229 508 IPR016164 GO:0003824|GO:0050660
Spst9g00646 518 Gene3D - 44 508 IPR016167 -
Spst9g00646 518 Pfam FAD binding domain 56 196 IPR006094 GO:0050660
Spst9g00646 518 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 228 IPR016166 GO:0071949
Spst9g00646 518 PANTHER GULONOLACTONE OXIDASE 32 509 - -
Spst9g00646 518 SUPERFAMILY FAD-binding/transporter-associated domain-like 44 225 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00646 Spst-Chr9 5650559 5654374 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00646 K00279 - gmx:100795849 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00646 9 5650559 5654374 Spst9g00646 9 5650559 5654374 ECH