Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00643 ATGTTGTACAAAATCCTGAAAAAGCTTCCTGTTCACAACCTGGTATTAGCTCAGCGTCTACAGATAATACTAAGTTACATCCTCATCCAACAACAGTGGCACCTGTCCTGCCTTCAGGGGTTGACCTCAAAATGGCAGGTACAAATATGCAAAACCAGGTTGTGCTTAGCCACAACTCTCATGCTGAAGCTCAAGGATGGGGTTCTGCTGGGGTTCCAAAGCCAGAACTACAGGCTTGGGGAGGTGTATCATCTCAACTCTGCGACTATGCCTGCCCAGCCAGCATCCCATGGCCCCTGGGGCGATGCTTCATTTGTGCAAAGACTTGTGGATGGAGAGGGAAATCAATATTCGCAAGTGTTGCGGCGTGGAAGGCAACATGAGGTCCTCAATGTTGTCCAATTGAGCCCTCTGAACCAACGCCACATTGTTAACAAGTGTCATGTTAACAACGGAGCTAGCAATGACCACTTTCTGAACCCTCTCTTCCCCCAACATCTTGGCCAAATTCATAATAATAGCAGCAGCCAAAGTGCGTTAGAGAGAGGTGAAGCAATGGCTGTGTCCTCTACCACCGCCCCAGTATGTATTCCTGCTAATAAGAACATTCCAACCCCTCATGTCCCAAAAATTGGTTTCGCAAGTACCATTGCTTTTACTGTGAAACCGCGGAGATTGTTACGTATCAGAAGCTCCTCAGCTGAGACCTCTGACTCAGGAGTAGATTCAGAGAGTAGTTCCATTGAAGTTCCAAAGGAACCCTCATCGTTAATTTCTGCTCTTAACGTCGAAAGGATTCTCCGTGGCTTACCAATTACAGATGCAGATCATTATGGTAGACTAGGTGTTCCAAGAGGATGTCCCTTTGAGATGGTGGGGGTTGCGTATAACAACAAGGTTCAAGAATTAAAGAGTCAGAATTTAGAGAAGGACGAAGTTGAGAAGAAATTAGAACTTCTCAAAGAATCATACACCATCCTGTCCTCAGAAGAAGAAAGAAGAATCTATGACTGGAGCTTGGCCAGAGTAGAGAATACAGACCAATTCGTTTGGCCGTTCGAGGTTGACATAACACAGACTAAAATCCCAGAAGAAGATCCTCCCATACTGGACACTGAAGATGTTGGACCAACTAGAGTGGTTGGGTATTTCTTGGTGGGATGGTTAGTGTTGGCAGTTGTGTTATCTATTGGACTAAATGTTTTAAACTGA 1212 0.453 MLYKILKKLPVHNLVLAQRLQIILSYILIQQQWHLSCLQGLTSKWQVQICKTRLCLATTLMLKLKDGVLLGFQSQNYRLGEVYHLNSATMPAQPASHGPWGDASFVQRLVDGEGNQYSQVLRRGRQHEVLNVVQLSPLNQRHIVNKCHVNNGASNDHFLNPLFPQHLGQIHNNSSSQSALERGEAMAVSSTTAPVCIPANKNIPTPHVPKIGFASTIAFTVKPRRLLRIRSSSAETSDSGVDSESSSIEVPKEPSSLISALNVERILRGLPITDADHYGRLGVPRGCPFEMVGVAYNNKVQELKSQNLEKDEVEKKLELLKESYTILSSEEERRIYDWSLARVENTDQFVWPFEVDITQTKIPEEDPPILDTEDVGPTRVVGYFLVGWLVLAVVLSIGLNVLN 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00643 403 Coils Coil 296 330 - -
Spst9g00643 403 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 186 400 IPR044199 GO:0009535|GO:0010598
Spst9g00643 403 SUPERFAMILY Chaperone J-domain 275 342 IPR036869 -
Spst9g00643 403 Gene3D DnaJ domain 272 349 IPR036869 -
Spst9g00643 403 FunFam NAD(P)H-quinone oxidoreductase subunit U chloroplastic 258 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00643 Spst-Chr9 5621520 5625792 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00643 K23052 - gmx:100793741 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00643 9 5621520 5625792 Spst9g00643 9 5621520 5625792 ECH