Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00634 ATGGATATCAGGTTGATGGATTTGGACACTCCATTGTTCAGCACTCTGCACCGAATCATGGATCTGACGGAGGACGCGGAAAAGAACTTGAGCGCTCCAACGCGGACATACGTGCGGGACGCGAAGGCAATGGCTGCGACACCTGCTGATGTGAAGGAGTATCCGAACTCTTACGTGTTCGTGATCGATATGCCTGGCTTGAAATCTGGGGACATTAAGGTGCAAGTTGAGGAGGACAACGTGCTTCTCATAAGCGGTGAGAGGAAGAGGGAGGAAGAGAAAGAAGGGGCCAAGTACTTGAGGATGGAGAGAAGGGTTGGCAAGTTCATGCGCAAGTTCACTCTCCCAGACAATGCCAACACCGAGGCTATAACTGCCGTCTGCCAGGACGGTGTGCTTACCGTCACCGTCAACAAGTTGCCTCCACCTGAGCCCAAGAAGCCCAAGACAATTGAGGTGAAGATTGGCTAA 471 0.5223 MDIRLMDLDTPLFSTLHRIMDLTEDAEKNLSAPTRTYVRDAKAMAATPADVKEYPNSYVFVIDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKYLRMERRVGKFMRKFTLPDNANTEAITAVCQDGVLTVTVNKLPPPEPKKPKTIEVKIG 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00634 156 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 40 154 IPR002068 -
Spst9g00634 156 Gene3D - 6 155 IPR008978 -
Spst9g00634 156 FunFam 17.3 kDa class II heat shock protein-like 11 155 - -
Spst9g00634 156 Pfam Hsp20/alpha crystallin family 50 154 IPR002068 -
Spst9g00634 156 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 12 154 IPR031107 -
Spst9g00634 156 SUPERFAMILY HSP20-like chaperones 14 148 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00634 Spst-Chr9 5545859 5546329 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00634 K13993 - gmx:111605749 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00634 9 5545859 5546329 Spst9g00634 9 5545859 5546329 ECH