Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00633 ATGAAGAAGGCGAAGAAGAGTGTTAAAGAGAATGGGGGAAAGTTCAGGGGTGCAGAGAGGTCTGCGTATTTCGCACGCAGAGAGGCAGCGAAGGTGCTGAGATTGGTTCTGGAAGGAGACGCTAAGCGCCGCGCTCTTGCCTCCATCAAATCCCTCATCTATCAACCTTCCGTTAGGAACAAGAAGGCCACCTTCGCTCTCCTTTGTCAAACCCTAAAACATCTTCCCATCATCAAGGATGTCTTGGAAGCTGTTTCCATTCTCAGCACCAAGTGGAAGAGGCAGCGAGAATTGGTTTATATCATTGTCTATGATATCCTTTTCGGCCAGGCGGTTTCACTGGTTGGTGATGCAGAGAAGTACCTTGTGCGCCACGAAGACGCCTTGCGTTCAACTCTTAAACAGCTTTTGTTACAGAAAAATGTGAAGACTGTTAAACAGTTGATTGCTCTGCATGAAGTTCCTGATGTTTCTGTGCCACGGTATGTTCGTGTGAATACTCTTAAACTGGACGTTGATTCTGCCTTGCTCGAACTTCAGAAAAATTTCTCGGTTCAAAAGGATAATCTACTGCCTGAATTACTGATACTACCTCCAGGCACTGATTTACATGATCATCCTCTTGTCAAGGATGGCAGTATCTTCATGCAAGGTAAGGCAAGTTCCATGGCAGCACCAGCTCTTAGCCCTCAACCAGGATGGGAGGTAGTTGGTCATCCTATCGATGGTTCTGAAGTTATTGATGCATGTGCAGCACCCGGAAACAAAACTATTCACCTGGCTGCCCTTATGAGGAGAAAAGGAAAGATTATAGCATGTGAGCTGAAAAAAGAAAGGGTTAAGCGTTTGAAAGACACTATAAAGCTATCTGGTGCTTCTAGCTCAGACATACAAGTCCTCAATGAGGATTTCTTGAACTTAAATCCCAAGGATCCTTCTTATTCTAAGGTGAATGCTATTCTCTTGGATCCTTCCTGCTCTGGTTCTGGTACCGCTGCCTCAAGACTAGACCATCTGCTCCCATCTAAAGCAGGAGGGCAGGATACTGATATGGAAAGATTGAATAAGCTTGCAACTTTCCAAAGAAAGGCTCTTCAGCATGCTTTACTTTTTCCAGCTCTTGAAAGAATTGTCTACAGTACATGTTCAATCAGCCAAATTGAGAATGAAGATGTCATCAAATCTGTTCTTCCCATAGCCAAATCATATGGATTTGAATTGGCAAAGCCCTTCCCCGAGTGGCAGTGTCGTGGTCTTCCTGTGTTTGAAGGCTCTGAATGCCTGGTTCGGACCGATCCCGCTAAGCATGGCGAGGGTTTCTTCATTGCTTTGTTCGCTAGGAAAGATGCAATCTCTTCGAAGTGTTCAAATAAAAATGAAACTAGAATCTTTCACAGCACTCCCGGAGTAAAAAACACGAGAAGAACGAAGAAACGCATACCGTTTATTAGCACTAACCCATTCAAAACGTGGTTATATGACCAACTGAAGTTGTAG 1497 0.4442 MKKAKKSVKENGGKFRGAERSAYFARREAAKVLRLVLEGDAKRRALASIKSLIYQPSVRNKKATFALLCQTLKHLPIIKDVLEAVSILSTKWKRQRELVYIIVYDILFGQAVSLVGDAEKYLVRHEDALRSTLKQLLLQKNVKTVKQLIALHEVPDVSVPRYVRVNTLKLDVDSALLELQKNFSVQKDNLLPELLILPPGTDLHDHPLVKDGSIFMQGKASSMAAPALSPQPGWEVVGHPIDGSEVIDACAAPGNKTIHLAALMRRKGKIIACELKKERVKRLKDTIKLSGASSSDIQVLNEDFLNLNPKDPSYSKVNAILLDPSCSGSGTAASRLDHLLPSKAGGQDTDMERLNKLATFQRKALQHALLFPALERIVYSTCSISQIENEDVIKSVLPIAKSYGFELAKPFPEWQCRGLPVFEGSECLVRTDPAKHGEGFFIALFARKDAISSKCSNKNETRIFHSTPGVKNTRRTKKRIPFISTNPFKTWLYDQLKL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00633 498 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 151 448 IPR001678 GO:0008168
Spst9g00633 498 Pfam 16S rRNA methyltransferase RsmB/F 240 445 IPR001678 GO:0008168
Spst9g00633 498 FunFam Putative 28S rRNA (Cytosine-C(5))-methyltransferase 152 216 - -
Spst9g00633 498 Gene3D Vaccinia Virus protein VP39 217 454 IPR029063 -
Spst9g00633 498 PRINTS RNA (C5-cytosine) methyltransferase signature 430 447 IPR023267 GO:0001510
Spst9g00633 498 PRINTS RNA (C5-cytosine) methyltransferase signature 374 390 IPR023267 GO:0001510
Spst9g00633 498 PRINTS RNA (C5-cytosine) methyltransferase signature 318 330 IPR023267 GO:0001510
Spst9g00633 498 PRINTS RNA (C5-cytosine) methyltransferase signature 247 257 IPR023267 GO:0001510
Spst9g00633 498 PRINTS RNA (C5-cytosine) methyltransferase signature 208 222 IPR023267 GO:0001510
Spst9g00633 498 Gene3D Sun protein; domain 3 152 216 - -
Spst9g00633 498 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 160 447 IPR029063 -
Spst9g00633 498 FunFam Methyltransferase NSUN5, putative 217 453 - -
Spst9g00633 498 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 29 447 IPR023267 GO:0001510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00633 K15264 - gmx:100775620 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00633 9 5539550 5545029 Spst9g00633 9 5539550 5545029 ECH