Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00613 ATGGAGGAAGGGTACCTCAGAAGCAAGTTCAAGACCGTGTGTGTCTTTTGTGGTAGCAACTCCGGCAATCGACAAGTCTTCAGTGACGCTGCGATTCAATTAGGGAATGAACTGGTTAAGAGAAACTTAGACTTGGTGTATGGTGGGGGCAGTGTTGGGCTGATGGGCTTAATATCTCAGAGAGTGTATGATGGAGGCTGCCATGTCCTAGGGATCATTCCAAAAGCTCTCATGCCTCTCGAGATAAGTGGTGAAACAGTAGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATATGGAACAATGGAAGAGCTGTTGGAGATGATAACATGGGCCCAACTTGGAATTCATAAAAAACCGGTTGGTCTACTGAATGTTGACGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTAAAGAAGGCTTCATCAAGCCTGGTGCACGGAATATTGTTGTCTCTGCTACTTCTGCCAAAGAACTTATGATGAAGATGGAGCATTACACTCCTTCGCACGAACATGTTACTCCTCATGAGAGCTGGCAGACGAAGCAATTAGGTAATTATCCAGATGCAGAGTGA 642 0.4455 MEEGYLRSKFKTVCVFCGSNSGNRQVFSDAAIQLGNELVKRNLDLVYGGGSVGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPGARNIVVSATSAKELMMKMEHYTPSHEHVTPHESWQTKQLGNYPDAE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00613 213 NCBIfam Rossman fold protein, TIGR00730 family 11 188 IPR005269 GO:0009691|GO:0016787
Spst9g00613 213 MobiDBLite consensus disorder prediction 191 213 - -
Spst9g00613 213 Gene3D - 9 204 - -
Spst9g00613 213 PANTHER LOG FAMILY PROTEIN YJL055W 7 210 - -
Spst9g00613 213 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Spst9g00613 213 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 10 204 - -
Spst9g00613 213 SUPERFAMILY MCP/YpsA-like 9 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00613 Spst-Chr9 5387555 5389793 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00613 K22522 - gmx:100785484 421.779