Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00611 ATGGATTCTTCACAAGGGTCTACTATTGCTGGTTTCGTGGACAATGCATCCATTCAGAGGAAAGAGTCTACTTTTGATGGCGTTCCTGTATATGCCAAGGAGCTAATCGCCGGAGGCTTTGCTGGTGCGCTTTCTAAGACCACTGTTGCACCTCTCGAACGAGTCAAGATACTTTGGCAGACAAGGACCCCAGGATTTCATTCTCTTGGGGTGTATCAATCTTTAAATAAATTAGTAAAGCGTGAAGGTTTTCATGGATTATATAAGGGAAATGGAGCTAGTGTTATCCGCATTGTTCCATATGCAGCCTTGCATTTTATGACATATGAGCGCTACAAAAGTTGGATCTTGAATAATTATCCAGTGTTAGGTTCGGGTCCTTTTATTGATCTTTTAGCAGGCTCTGCTGCTGGGGGAACGTCAGTTTTATGTACCTACCCCTTGGATCTGGCTCGTACCAAACTTGCTTACCAGGTGGTGGACACAAGAGGAAGTATCAAAGATGGTATGAGAGGACTTCAACCGACACATAATGGAATTAAAGGTGTGCTCACAAGTGTCTATAAGGAGGGGGGAATTCGTGGACTTTATAGGGGTGCAGGACCAACCCTTACTGGAATTCTTCCATATGCTGGTTTAAAGTTCTACATGTACGAGAAATTGAAGACTAACGTTCCAGAAGAACATCAAAATTCCATTATGATGCGTCTTTCTTGCGGAGCTCTAGCTGGATTGTTTGGGCAGACTTTAACATACCCTTTAGATGTTGTCAAGAGACAGATGCAGGTTGGCAGCCTGCAAAATGCTACTCATGACAATGTCAGATACAAAAATACCGTTGATGGACTTAGGACGATTGTTCGTAATCAAGGATGGAGGCAGCTGTTTCATGGCGTAAGCATTAACTATATAAGGATTGTTCCTTCAGCTGCAATTAGTTTCACCACATACGACATGATGAAGTCTTGGCTTGGCATACCACCTCAACAAAAGTCTCGATCAGTTTCGGGAGCATGA 1017 0.4317 MDSSQGSTIAGFVDNASIQRKESTFDGVPVYAKELIAGGFAGALSKTTVAPLERVKILWQTRTPGFHSLGVYQSLNKLVKREGFHGLYKGNGASVIRIVPYAALHFMTYERYKSWILNNYPVLGSGPFIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTRGSIKDGMRGLQPTHNGIKGVLTSVYKEGGIRGLYRGAGPTLTGILPYAGLKFYMYEKLKTNVPEEHQNSIMMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQNATHDNVRYKNTVDGLRTIVRNQGWRQLFHGVSINYIRIVPSAAISFTTYDMMKSWLGIPPQQKSRSVSGA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00611 338 Pfam Mitochondrial carrier protein 232 324 IPR018108 -
Spst9g00611 338 Pfam Mitochondrial carrier protein 31 119 IPR018108 -
Spst9g00611 338 Pfam Mitochondrial carrier protein 127 225 IPR018108 -
Spst9g00611 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 224 IPR018108 -
Spst9g00611 338 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Spst9g00611 338 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Spst9g00611 338 PRINTS Mitochondrial carrier protein signature 240 262 IPR002067 GO:0055085
Spst9g00611 338 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Spst9g00611 338 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Spst9g00611 338 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Spst9g00611 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 231 323 IPR018108 -
Spst9g00611 338 Gene3D Mitochondrial carrier domain 29 325 IPR023395 -
Spst9g00611 338 SUPERFAMILY Mitochondrial carrier 32 319 IPR023395 -
Spst9g00611 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 115 IPR018108 -
Spst9g00611 338 PANTHER SOLUTE CARRIER FAMILY 25 32 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00611 Spst-Chr9 5378219 5381760 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00611 107 333 Organic Solute Cotransporters AT1G14560 70.563 5.97e-116 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00611 - - vum:124826084 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00611 9 5378219 5381760 Spst9g00611 9 5378219 5381760 ECH