Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00592 ATGGCGGAGGAAGCACAGTATTCATCGGGAACGGAGTCCGGATCCCTCAAGCGCAAGTACGAAGACCAACCTTCCGACAGGCCCACCGGCTTCTCCGCGGGCCCCGCCACCGGCATCGAGCTAGCGAAGCAGCGTGCTCAAGAAGTCGCCGCTCGCCTCCTCCTCAGCGGTGGTCCTCCTCCACCCGTCGACGCTAAGCGTCCCAAACCCGATAATGGTGCTCCTACATCTGGCTTCGATTCTTTCGATGCGAAGCCTCAGTATTCGTCCGTTCCTCCTGTCTCCTACAGTCATCAAGGCACAAGCAAGAAGATTGATATCCCGAACGGTAGGGTTGGCGTGATTATTGGCAAAAGTGGAGAGACCATTAAGTATCTCCAGTTGCAGTCTGGTGCCAAAATTCAAGTTACCCGCGATATGGACGCTGACCCTAATTCTACTACTAGGACCGTTGAGCTTATGGGTACTACTGAGGCAATTGCGTCTGCTGAGAAACTCATTAATGAAGTTCTTGCTGAGGCTGAATCCGGGGGTTCTGGCATTGTTGCTCGGAGGCTGACTGGACAAGCTGGGTCCGATGAATTTGTCATGAAAATCCCAAATAATAAGGTTGGCCTTATAATTGGTAAAGGAGGAGAAACTATAAAGAATATGCAAGCTTCTACTGGAGCTAGGATTCAGGTCATACCTCTCCATCTTCCCCCAGGTGACACATCAACTGAAAGAACATTAAAAATTGATGGGACTTCTGAGCAAATCGAGTCTGCAAAGCAGTTGGTTAATCAAGTCATCAGTGGTGAGGGAGAAAATAACTTGCTAAACTATGTGATGATTCCACGTTAG 843 0.497 MAEEAQYSSGTESGSLKRKYEDQPSDRPTGFSAGPATGIELAKQRAQEVAARLLLSGGPPPPVDAKRPKPDNGAPTSGFDSFDAKPQYSSVPPVSYSHQGTSKKIDIPNGRVGVIIGKSGETIKYLQLQSGAKIQVTRDMDADPNSTTRTVELMGTTEAIASAEKLINEVLAEAESGGSGIVARRLTGQAGSDEFVMKIPNNKVGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIDGTSEQIESAKQLVNQVISGEGENNLLNYVMIPR 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00592 280 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 195 279 IPR036612 GO:0003723
Spst9g00592 280 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 102 178 IPR036612 GO:0003723
Spst9g00592 280 SMART kh_6 191 265 IPR004087 GO:0003676
Spst9g00592 280 SMART kh_6 99 172 IPR004087 GO:0003676
Spst9g00592 280 ProSiteProfiles Type-1 KH domain profile. 192 260 - -
Spst9g00592 280 ProSiteProfiles Type-1 KH domain profile. 100 167 - -
Spst9g00592 280 MobiDBLite consensus disorder prediction 82 103 - -
Spst9g00592 280 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 87 269 - -
Spst9g00592 280 Gene3D K Homology domain, type 1 95 193 IPR036612 GO:0003723
Spst9g00592 280 MobiDBLite consensus disorder prediction 1 103 - -
Spst9g00592 280 Pfam KH domain 196 261 IPR004088 GO:0003723
Spst9g00592 280 Pfam KH domain 104 169 IPR004088 GO:0003723
Spst9g00592 280 Gene3D K Homology domain, type 1 194 267 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00592 Spst-Chr9 5267206 5268976 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00592 K13210 - gmx:100797476 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00592 9 5267206 5268976 Spst9g00592 9 5267206 5268976 ECH