Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00567 ATGCTGTCTAGAAAGGCTAGTGAGGACTCTCACGGCCAAGACTCTTACTACTTTTTAGGGTGGCAAGAGTACGAGAAGAATCCTTACCACCTCATTCGAAACCCAACTGGAATCATTCAGATGGGACTTGCAGAGAATCAGCTTTCATTTGACCTTCTTAAATCATGGCTTCGAAGAAATCCTGATATAGTGGGGATGAAGAAAGATGGGCTATCGTCGTTAGTACTTGATCATGAAGTCATCAGCTATGGTGAACTGGTGGAATTTATGTCGAAAATAAGAGGAAATGGAGTAAAATTTGCTCCAGAGAAGCTCGTCCTAACAGCTGGTGCCACTCATGCTAATGAAATTATGATGTTTTGCCTTGCTGATCCAGGAGAGGCTTTCATTCTGCCCACACCCTATTATCCTGGGTTTGATAGAGATCTGAAATGGAGAACTGGGGTTGAGATTGTCCCAATGCATTGCTCAAGTTCAAATGGTTTCAGAATCACTTCCTCTTCTTTAGAAGAAGCCTATCAGAAAGCACAAAAATTGAATCTCAAAGTCAAAGGGGTCTTTGTAACTAACCCCTCGAATCCACTAGGCATAACCATGACCAAAACGGAACTTTACCACCTAATCGATTTCGCAATTGAGAAGAACATTCACATAATCAGCGATGAAATCTACTCGGGCACGGTTTTCAACTCGCCTAAATTCGTGAGCATCATGGAAGTTGCGAACGAGAGAACTAGTAACATGAACAACGTTCGGAATCGCATTCACATAGTATATAGTCTCTCCAAAGACCTTGGAGTACCAGGATTTCGGGTGGGAATGATTTACTCAAACAACGAAATGCTGGTGGGTGCTGCAACAAAAATGTCAAGCTTTGGATTGGTTTCCTCACAGACTCAATATTTGGTGGCCAACTTACTGAAGGACAAGAAGTTCACTTCCAAGTACATTGAAGAGAATCAAAGGAGACTTAAGAGGCGCAAGGAGATGCTAAAGTCTGGCCTCAGAAACGCAGGGATTCGGTGTTTGAAAAGCAATGCAGGGTTGTTCTGTTGGGTGGACATGAGACATTTATTAAGCTCTGCCACTTTTGAAGCAGAGAAGGAGCTTTGGATGATGATTCTTTGCCATGTTGGGTTGAACATATCTCCTGGCTCTTCTTGCCACTGCTATGAACCTGGCTGGTTCAGGGTATGCTTTGCCAACATGTCCGAAGACACATTAAAACTCGCCATGCGCCGAATGAAGGCTTTTATAGACTCAACCGTCTCTGTTGTCAACCAGGGTAAAGGTTGTACTTATGAGCAATCTGTGAATGCCATAAGAGAATTAAGATCATGGCAAATGCATGGAATTAGACAAATCATTGGTGACCATTCTGACATAGGGGATTGGCCACGTGGAGAATCCGTTACTCACGCATTTCGTGTGTTGGCGGTTTCCAACGAGGAGAGATAG 1458 0.4342 MLSRKASEDSHGQDSYYFLGWQEYEKNPYHLIRNPTGIIQMGLAENQLSFDLLKSWLRRNPDIVGMKKDGLSSLVLDHEVISYGELVEFMSKIRGNGVKFAPEKLVLTAGATHANEIMMFCLADPGEAFILPTPYYPGFDRDLKWRTGVEIVPMHCSSSNGFRITSSSLEEAYQKAQKLNLKVKGVFVTNPSNPLGITMTKTELYHLIDFAIEKNIHIISDEIYSGTVFNSPKFVSIMEVANERTSNMNNVRNRIHIVYSLSKDLGVPGFRVGMIYSNNEMLVGAATKMSSFGLVSSQTQYLVANLLKDKKFTSKYIEENQRRLKRRKEMLKSGLRNAGIRCLKSNAGLFCWVDMRHLLSSATFEAEKELWMMILCHVGLNISPGSSCHCYEPGWFRVCFANMSEDTLKLAMRRMKAFIDSTVSVVNQGKGCTYEQSVNAIRELRSWQMHGIRQIIGDHSDIGDWPRGESVTHAFRVLAVSNEER 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00567 485 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 104 124 - -
Spst9g00567 485 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 180 204 - -
Spst9g00567 485 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 126 147 - -
Spst9g00567 485 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 216 239 - -
Spst9g00567 485 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 41 67 - -
Spst9g00567 485 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 286 309 - -
Spst9g00567 485 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 254 278 - -
Spst9g00567 485 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 419 - -
Spst9g00567 485 SUPERFAMILY PLP-dependent transferases 9 420 IPR015424 -
Spst9g00567 485 Gene3D Aspartate Aminotransferase, domain 1 27 414 IPR015422 GO:0003824
Spst9g00567 485 CDD AAT_like 85 417 - -
Spst9g00567 485 FunFam 1-aminocyclopropane-1-carboxylate synthase 2 283 414 - -
Spst9g00567 485 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 260 273 IPR004838 GO:0003824|GO:0009058|GO:0030170
Spst9g00567 485 Gene3D - 61 309 IPR015421 GO:0003824
Spst9g00567 485 Pfam Aminotransferase class I and II 39 414 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00567 Spst-Chr9 5090164 5095443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00567 K01762 - gmx:100803507 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00567 9 5090164 5095443 Spst9g00567 9 5090164 5095443 ECH