Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00563 ATGGCACCACCGTTGTTCAATTGGGGGGTGAAGGACACTCACAGGGGAACCCCAGTGGTGGTGAAGATGGAGAACCCAAATTGGTCGATGGTGGAACTGGAAGGTCCCGAAGAAGAGGACTTAATGATACCAAATTCTCCTTCGGGGGTTTCACGAGATAAAGGAAAAGGAAGAGGAAAAAACGCGAAACAACTCACATGGGTTCTTCTCCTTAAAGCTCATCGCGCGGCGGGTTGCTTGACCTCCCTCGCGCCAGCATTGTGGGGACTCGCCTCCGCCGTGAAGCGCCGCGTTGCCGCCGGTAAAACTGACGCCGATACCGACGGCGGCAGAGAGCTCGAGAACCCCACCGTGAAGACGCGTTTCTATTATTGCATCAAGCTCTTTCTGTGGCTTTCCGTTTTTCTCTTGTTTTTCGAGGTTGCTGCTTACTTCAAAGGGTGGCATTTCGGTGCGGCGAGGCTTCAGTTGGAGCATTTGCTATGGGCACCCGCGTTTGGAGTTAAGGATTTCTTCGATTGGCTGTACGCGCGGTGGGTTTTGGTTCGCGTGGAGTATCTCGCTCCTCCTCTGCAGTTTCTAACCAATGCGTGCATCGTGCTTTTTCTTATTCAGAGTATGGATAGACTTGTTCTGTGTTTGGGATGTTTCTGGATCCGGTTTAGGAAGATCAAGCCTGTCCCCAAAGGTGGGGTTGAAGTTGTAGATCTTGAATCTGGAGAAAGTAAGGGTTTTTCGTATTTCCCGATGGTCCTCGTGCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAATCGATTGCTGCGGTGTGTAATTTGGATTGGCCGAAGGGGAAGTTGTTGATTCAGGTTTTGGATGATTCCGATGACCCAACGACGCAGTTGCTAATAAAGGAGGAGGTTCAGAAGTGGCAACATGAGGGTGCCAACATTTTGTACCGGCATCGCGTGATTAGAGATGGGTACAAGGCTGGGAATTTGAAATCCGCCATGAATTGTAGCTACGTCAAAGACTACGAGTTTGTTGCAATATTTGATGCAGATTTTCAGCCCACTCCAGATTTCCTCAAAAAAACTGTTCCTCATTTCAAGGATAATGATGAATTGGGGCTAGTTCAAGCAAGATGGTCCTTTGTGAACAAGGATGAGAACCTGCTAACGAGGTTGCAGAACATTAACCTGACTTTTCATTTTGAGGTGGAGCAGCAAGTAAATGGTATTTTCATTAACTTCTTTGGGTTCAATGGAACCGCTGGAGTGTGGAGAATAAAGGCTTTGGAAGATGCTGGTGGTTGGTTGGAGAGGACTACTGTTGAGGACATGGACATTGCCGTACGAGCTCATCTTCATGGCTGGAAATTCATTTTCCTCAATGATGTCGAGTGCCAATGCGAGCTCCCTGAATCTTATGAAGCTTACAGGAAACAGCAGCATAGATGGCATTCTGGGCCAATGCAATTGTTCCGCCTTTGCTTGCCTGATATCGTACGGTCCAGGATAAGTGTGTGGAAGAAATTCAACATGATATTTCTCTTCTTCCTTCTTAGAAAACTGATATTACCATTCTATTCATTCACCTTGTTTTGTATAATTCTACCTATGACAATGTTCGTGCCGGAGGCTGAACTTCCTGCGTGGGTTGTGTGCTACATCCCTGCTGCCATGTCCTTTCTCAACATTCTTCCAGCCCCAAAGGCCTTTCCCTTTATAGTCCCGTATCTCCTATTTGAGAACACCATGTCAGTTACCAAGTTCAATGCCATGATCTCAGGCCTGTTCCAGCTAGGTAGTGCATACGAGTGGGTGGTCACTAAGAAATCTGGTCGCTCCTCTGAAGGCGATTTGGTTTCATTGATTGAGAAAGGACCAAAGCATCAAAGAGGGTCCTCAGCACCTGATCTTGAGGTAATGAAAGAGGAACTTAGAAGGCAGGAGCTGCAGAAGGCCTCTAAGAAAAAGAAAAAACATAACAGAATATATATGAAGGAGCTTGCTTTGGCCTTTTTACTCCTAACAGCCTCAGCAAGGAGTCTCCTCTCTGCCCAAGGGATCCATTTCTACTTTTTGTTATTCCAGGGAATATCATTCCTATTGGTTGGTCTGGACTTGATTGGTGAACAGGTGGACTGA 2133 0.4688 MAPPLFNWGVKDTHRGTPVVVKMENPNWSMVELEGPEEEDLMIPNSPSGVSRDKGKGRGKNAKQLTWVLLLKAHRAAGCLTSLAPALWGLASAVKRRVAAGKTDADTDGGRELENPTVKTRFYYCIKLFLWLSVFLLFFEVAAYFKGWHFGAARLQLEHLLWAPAFGVKDFFDWLYARWVLVRVEYLAPPLQFLTNACIVLFLIQSMDRLVLCLGCFWIRFRKIKPVPKGGVEVVDLESGESKGFSYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKGKLLIQVLDDSDDPTTQLLIKEEVQKWQHEGANILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVPHFKDNDELGLVQARWSFVNKDENLLTRLQNINLTFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVRSRISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPAAMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKGPKHQRGSSAPDLEVMKEELRRQELQKASKKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00563 710 Coils Coil 635 655 - -
Spst9g00563 710 SUPERFAMILY Nucleotide-diphospho-sugar transferases 251 528 IPR029044 -
Spst9g00563 710 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 178 707 - -
Spst9g00563 710 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 243 466 IPR029044 -
Spst9g00563 710 FunFam probable xyloglucan glycosyltransferase 5 242 467 - -
Spst9g00563 710 Pfam Glycosyl transferase family group 2 343 537 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00563 Spst-Chr9 5052897 5055599 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00563 4 710 Miscellaneous Gene Families AT4G07960 76.667 0.0 1079
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00563 - - gmx:100805969 1308.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00563 9 5052897 5055599 Spst9g00563 9 5052897 5055599 ECH