Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00554 ATGTCATGGCTGGCTCGCTCCTTCGCAAATTCTCTCCGACTCGATGGTGACGGAGACGACGAAAACGTCATCGTACTTGATCCACCTACCACGTCATCGAGTGACCTCCCGCAACCGCAAGAACTAGAAAATGCATTCCGATCAGAAGGAGAAGAAGATGAAGAAGACGAAGATACGGAAGGGCGTGGGGTCAAAGAGGACCTCGACGAAATCAAGCAAACCCTAACTCGTCAATTTTGGGGGATGGCCTCCTTCCTCGCTCCGCCGTCAACGGATTCTCTTTCTCATGCACAATCCGATCCCTCTTCGTTCATCTCCGATCAATTCAAACACCGGTCTCTTTCTCAGAACGAAGAACCGCAATTAGATGAGGTTTCCCATCGCTCTAATTCGGTTTCGTTAGGATCCGATTCGGAAGGGGATTGCCGTCTCGAATGTTGCGCGGTTGGAATCACGGAGGAGGTCTTGGCCTTCGCGATGAACATTGCTATGCATCCTGAGACGTGGTTGGATTTTCCTATTGATGAAGAAGACGATACTGACGATTTTGACATGTCTGATGCACAACGAGAGCATGCAGCGGTTGTTGAAAGATTAACTCCTAGATTAGCTGCGCTCAGAATTGAACTATGCCCTTGCCATATGAGTGAAAGTTATTTCTGGAAAGTATATTTCGTACTTTTGCATTCAAGGCTTAACAAAGAAGATGCAGGGGTTTTGTCTACACCCCAGATCACGGCAGCCAGAGCAATGTGGATGCAGGAATTGCATAAACAAACAAAACCCGACTTTAAAAATTTTGGAAGAAGTGTTTCCTACTCAATAGACAGGCACAATGAATTCACTCCCAGCTTATTGGATGATGCTTATTCTGATGACAGACCTAGTCAGACGTATGGATATAGAACAACCTCGTTTTCCATGAGGTCAGATTATGAGACTGAGAAATACATGGTTGAAACTTCTGGAACGCATTTCACTGATAAGTCTGTTATTGAGGAAAATTCAATTATTAAAACTGAAAACACGGATCTGAAATGTGGCCGACCCTCTCAAATTATTATTGAGGATTACGATGATGAGGATGACGATGAATGGCCAGAGGAAGATTCTGATTTAGAGGGATATGGTGGAACAACTCACCCCATATTTAATGCAAATGAAGAAGACATATCTTTTAGCGACCTCGAGGATGATGATTATGGCATTAAACATGTTAGTTCCTGTACAGAGGGTTCGAAGTTGGTATGA 1251 0.4428 MSWLARSFANSLRLDGDGDDENVIVLDPPTTSSSDLPQPQELENAFRSEGEEDEEDEDTEGRGVKEDLDEIKQTLTRQFWGMASFLAPPSTDSLSHAQSDPSSFISDQFKHRSLSQNEEPQLDEVSHRSNSVSLGSDSEGDCRLECCAVGITEEVLAFAMNIAMHPETWLDFPIDEEDDTDDFDMSDAQREHAAVVERLTPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKEDAGVLSTPQITAARAMWMQELHKQTKPDFKNFGRSVSYSIDRHNEFTPSLLDDAYSDDRPSQTYGYRTTSFSMRSDYETEKYMVETSGTHFTDKSVIEENSIIKTENTDLKCGRPSQIIIEDYDDEDDDEWPEEDSDLEGYGGTTHPIFNANEEDISFSDLEDDDYGIKHVSSCTEGSKLV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00554 416 SUPERFAMILY BSD domain-like 150 236 IPR035925 -
Spst9g00554 416 MobiDBLite consensus disorder prediction 47 63 - -
Spst9g00554 416 Pfam BSD domain 180 236 IPR005607 -
Spst9g00554 416 ProSiteProfiles BSD domain profile. 180 232 IPR005607 -
Spst9g00554 416 MobiDBLite consensus disorder prediction 109 134 - -
Spst9g00554 416 MobiDBLite consensus disorder prediction 359 385 - -
Spst9g00554 416 MobiDBLite consensus disorder prediction 26 41 - -
Spst9g00554 416 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 401 - -
Spst9g00554 416 SMART wurzfinal6 180 232 IPR005607 -
Spst9g00554 416 Gene3D BSD domain 149 240 IPR035925 -
Spst9g00554 416 MobiDBLite consensus disorder prediction 10 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00554 Spst-Chr9 4928868 4932185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00554 146 232 EF-hand Containing Proteins AT1G69030 29.897 3.77e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00554 - - gmx:100794286 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00554 9 4928868 4932185 Spst9g00554 9 4928868 4932185 ECH