Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00552 ATGAAGAATGGGTTTGCGACAGTCACAGTGGTTGTTGTGATGGTGTCACTGGTTTGCACGTGTGGGGGAAGCACGAGCGGGAACCTACACCCTTTGATTCTAATACCTGGTAATGGAGGGAACCAGCTAGAAGGCAAGTTGAGCAGGGAGTACAAGCCCTCCAGTTTCATCTGCGAATCGTGGTACCCTCTTGTCAAGAAAAATAAAGGCTGGTTCAGACTTTGGTTTGATTCCAGTGTCATTCTTGCTCCTTTCACTCACTGCTTTGCCGAACGCATGACCCTTCACTACCACCCACAACTCGATGATTACTTCAACACCCCTGGAGTTCTCACTCGGGTCCCTCAATTTGGTTCCATCAATTCCCTTCTTTATCTCAACCCTCATCTCAAGCATATTACCGAATACATGGCACCCCTTGTGGATTCATTACAAAAGCTTGGTTATGTTGATGGCGAGACTCTATTTGGAGCCCCCTATGACTTTCGATATGGTCTAGCCGCTGAAGGTCACCCCTCACAAGTGGGTTCCAAGTTCCTAAAAGACCTAAAGAACTTGATAGAAGAAGCATGCGCTTCCAACGATGGGAAGCCAGTGATACTTCTCTCCCACAGTTTAGGAGGCCTATTTGTCCTACAACTCCTGATTCGAAACCCCCCCTCTTGGCGTGAAAAATTCATCAAACACTTTATTGCTCTTTCAGCTCCATGGGGTGGTGCTATTGACGAAATGCTCACCTTTGCATCTGGCAACACTCTAGGAGTGCCCTTAGTGGACCCTTTGTTAGTGAGGGGTGAACAGAGAAGCTCCGAGAGTAACCTTTGGCTTTTGCCTAACCCCAAAATATTTGGTCCTCAAAAACCAATTGTGGTCACTCCAAATAAGACCTATTCCGCACATGACATGCTTGATTTTCTCAATGACATTGGCTTTCCCGAAGGGGTTTACCCTTATAAAACACGCATTGTACCCTTGATAGGGAACATTCAAGCGCCACACGTGCCTATAACTTGTATTATGGGATCAGGAATGAGAACCTTGGAAACTTTGTTTTATGAGAAAGGTGATTTTGACGAACGGCCAGAAATCTCATATGGGGATGGTGATGGAACAGTGAACTTGGAGAGCTTGTTGGCGCTTGAATCACTATGGAAAGAGGAGAAAAGTCAGTACCTTAAAGTGGTTAAGATAGATGGTGTATCCCATAGTTCAATACTCAAAGATGAAGTTGCTCTTAATGAAATTGTTGGGGAGATTAGTACAATTAATTCTCATGTTTTCGGGGTAAATAATGTTTGA 1299 0.448 MKNGFATVTVVVVMVSLVCTCGGSTSGNLHPLILIPGNGGNQLEGKLSREYKPSSFICESWYPLVKKNKGWFRLWFDSSVILAPFTHCFAERMTLHYHPQLDDYFNTPGVLTRVPQFGSINSLLYLNPHLKHITEYMAPLVDSLQKLGYVDGETLFGAPYDFRYGLAAEGHPSQVGSKFLKDLKNLIEEACASNDGKPVILLSHSLGGLFVLQLLIRNPPSWREKFIKHFIALSAPWGGAIDEMLTFASGNTLGVPLVDPLLVRGEQRSSESNLWLLPNPKIFGPQKPIVVTPNKTYSAHDMLDFLNDIGFPEGVYPYKTRIVPLIGNIQAPHVPITCIMGSGMRTLETLFYEKGDFDERPEISYGDGDGTVNLESLLALESLWKEEKSQYLKVVKIDGVSHSSILKDEVALNEIVGEISTINSHVFGVNNV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00552 432 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 26 421 - -
Spst9g00552 432 SUPERFAMILY alpha/beta-Hydrolases 26 418 IPR029058 -
Spst9g00552 432 Gene3D alpha/beta hydrolase 335 421 IPR029058 -
Spst9g00552 432 Gene3D alpha/beta hydrolase 79 275 IPR029058 -
Spst9g00552 432 Pfam Lecithin:cholesterol acyltransferase 72 279 IPR003386 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00552 Spst-Chr9 4904472 4906133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00552 5 432 Acyl Lipid Metabolism Gene Families AT1G27480 60.789 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00552 - - gmx:100804027 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00552 9 4904472 4906133 Spst9g00552 9 4904472 4906133 ECH