Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00528 ATGTCGAATCGATCAGGTCAGGGTAGACAAGACAACAAGGGTTTCACCAAAATCCACAAGAAATTTGTCCCCAAAAATTCCAATCCAACCCTCTCAACCTCCCTTAGACAAACCCAACCATTCATCCCCGCCACCACTAGTGGAACCTCAAACAGAGGGCAAACTGGGAATTTTGTTAAATACTTACCACAAGACGAGGCCGTGGCGGCGGGTCTCGGCGCGGAAGATGGAGCTTTGGATCCCCTCCACTCTCAGAGAGTCGTAGATCTTTCCAACACACTCTTGTCACTTTTGCTCACGTGCAAACCCAAGCAATTCTGGACTCAAGTGGCTGCTGACACTTCCCTTCACGAGTTTTTAGACAGCTTCTTGCAATTCAGGAGTAGGTGGTATGATTTTCCTCATCGCGGGGTGAAAGGGATTGTTGCAGGTGTTATTGTTGGAGAGATTGATTTGAGTCGCCGTGTTTTCATGGTATTGTATCGCATATCTTCGAATAAAGACCCTGGTGCTCGGCCGGCCGATGCCCTCAGTTTGAGAGACCATGGAGGTGGGATCTCGTTTAACCTTCTTTTGGTTGTGGACAATAAAGACATTTTTATTGATGTTAATGTGAAGGCTACAATGTATAAAGAGAAAAAGTTGCTTGAATTGCCAAAGTTGTTGGATATATGTGCCATATACTATCACGAAAATGAAGAACTGACAAGATCACTGGTTAGAAATGCTTTAAATGCTCAACCTTGGATCCACAATAATCTGATCGGAGTAATAACCCATTTTCTAGGAATTGTCAGCACAATGCATGAACGTTGCAGTTCATCATTGGAGGTGTTATTTTCTTCTGGAAATCTCGATCACCATAATGCTGCTTTTCTTCAAGCTGATCTGCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAATGGATTCTTTTGTTAGTGCATACGAACCAGCAGCTGTATTCTTTTCTTGTCCAGTTGAAATGAGTTATGGAAACGAGGAACTGCTGAGCCTCCTTGCCAGATTGCATGATTCACTAATTCCATCATTGCAGAAGGGATTCCGAATGATGTTTTCTGACAAACACAACGACTCGGTATCTGATATCTTCGTTAGTCTGAAGATGTTAAAAATAAGATTGGTAAAGTTTGGTTGGCAACTATTGCACTTGTGTTATCTAAGTGATGAAGTGTTCAGAGATGGCCTCCCTCTTCCAGCTTCCACGAAGATGTTTCCTGCCAATGTAGAGGACCCAGTCATCCGAGCAGATATTCTGGTTCAAACATTTAGAGAGATCAATTCAGTATCATCACATTCTCGGGAAATCCATCAGAAGGAAACATTTCTTCAAGATGTTGAAAGAAATTTCAGTTTACTAAGCAGGATTGAAAGATTAAAGGATAGTGGATGGATATTCATTGATGATGAACAGTTTCAATATCTATTCGGGATGTTGAGTACTGTGAAAGAGATTTATAAGGACCCATATTCTGCAGAAACCCCTGTGCCAAACCAGTCATTGCTGACAGATGAAGATGCTGCAATTGCAGAGTCAAACATCAGTCAAATTAGGGACCTTTTCCCTGATTACGGTAAAGGATTTTTAGCTGCGTGTCTTGAGGTCTATGACCAAAATCCAGAAGAGGTTATTCAAAGAATTTTAGAGGGAACCCTTCATGAAGATCTGCAGAACCTGAACACCTCGCTAGAGACATTGCCACCAGCCAAGTCTACCACCGTGGGTGGGAAAGATAAAGGAAAAGGTAAATTAATTGATTCTACGCCAGCATCCTCAAGTCCAGAAGTTGTCAGGGAGAAGCAACAGACACAGGGGTCATTGATGTCGTCCTCTGCTTCGCTAGGAAAATTTGTGCGGAAATCTAAAGCTGACATACCTGATATCAGTCTTTTGGATAAAAAAGACGAGAAAGATACATCAAAAACTGCTGCTATGATTTTACAATATGAATATGAAGATGAGTATGACGACTCTTTTGATGACTTGGGTTTAAGTGTAGCAGACTCTGGAGTAGAAGAACATGAGACACTAGGTGACCAAATAAATGCAAAATCAGGAAAATCGTGGGCATCAGAGAGTGGAAACTCGGTAAAAAATGCCCCTGATTCAAAATGGGGCTCCAGGAGAAAGCCACAGTACTATGTGAAGGATGGTAAGAATTACAGCTACAAAGTGGCTGGTGCGGTAGCAGTGGCAAATTCTGATGAAGCTTCACTAATAACGCAAGCTCAGAAAGAGTTAATACATGGCCTTGGACGTGGTGGCAACCTTCCTCTTGGTGCAGTAAAGAAGTTGACAGATTCCTACAAGGAGGATGATAACCAATTCCAGGTTTCTGAAATGGAAGGGAGAGGGGTTGCGGCCAATTCTTTTGGTAGGGGTAGTAGGAAGGAAGGTGGAAGACAGATTGCATCTCATCAGCAGCAGGAGCAACAATCTGATGATTCTGAGGTGGATGGGAATAACCAAAGGGGTAGAGGAAGAGGGAGAGGGAGGGGCAGGGGAGGAGGAAGAAACAATCACCACCAGAAGGACCGAGCCATGAAGAAGCATTTCTCTGGAATGAGCGGTTATTAA 2604 0.4293 MSNRSGQGRQDNKGFTKIHKKFVPKNSNPTLSTSLRQTQPFIPATTSGTSNRGQTGNFVKYLPQDEAVAAGLGAEDGALDPLHSQRVVDLSNTLLSLLLTCKPKQFWTQVAADTSLHEFLDSFLQFRSRWYDFPHRGVKGIVAGVIVGEIDLSRRVFMVLYRISSNKDPGARPADALSLRDHGGGISFNLLLVVDNKDIFIDVNVKATMYKEKKLLELPKLLDICAIYYHENEELTRSLVRNALNAQPWIHNNLIGVITHFLGIVSTMHERCSSSLEVLFSSGNLDHHNAAFLQADLLEVMDFINDAIVSMDSFVSAYEPAAVFFSCPVEMSYGNEELLSLLARLHDSLIPSLQKGFRMMFSDKHNDSVSDIFVSLKMLKIRLVKFGWQLLHLCYLSDEVFRDGLPLPASTKMFPANVEDPVIRADILVQTFREINSVSSHSREIHQKETFLQDVERNFSLLSRIERLKDSGWIFIDDEQFQYLFGMLSTVKEIYKDPYSAETPVPNQSLLTDEDAAIAESNISQIRDLFPDYGKGFLAACLEVYDQNPEEVIQRILEGTLHEDLQNLNTSLETLPPAKSTTVGGKDKGKGKLIDSTPASSSPEVVREKQQTQGSLMSSSASLGKFVRKSKADIPDISLLDKKDEKDTSKTAAMILQYEYEDEYDDSFDDLGLSVADSGVEEHETLGDQINAKSGKSWASESGNSVKNAPDSKWGSRRKPQYYVKDGKNYSYKVAGAVAVANSDEASLITQAQKELIHGLGRGGNLPLGAVKKLTDSYKEDDNQFQVSEMEGRGVAANSFGRGSRKEGGRQIASHQQQEQQSDDSEVDGNNQRGRGRGRGRGRGGGRNNHHQKDRAMKKHFSGMSGY 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00528 867 SMART cue_7 518 560 IPR003892 GO:0043130
Spst9g00528 867 CDD CUE_ASCC2 520 559 IPR041800 -
Spst9g00528 867 SUPERFAMILY UBA-like 520 575 IPR009060 GO:0005515
Spst9g00528 867 MobiDBLite consensus disorder prediction 1 34 - -
Spst9g00528 867 MobiDBLite consensus disorder prediction 574 619 - -
Spst9g00528 867 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 15 866 - -
Spst9g00528 867 MobiDBLite consensus disorder prediction 690 711 - -
Spst9g00528 867 MobiDBLite consensus disorder prediction 686 719 - -
Spst9g00528 867 MobiDBLite consensus disorder prediction 595 619 - -
Spst9g00528 867 Pfam CUE domain 520 560 IPR003892 GO:0043130
Spst9g00528 867 MobiDBLite consensus disorder prediction 836 857 - -
Spst9g00528 867 ProSiteProfiles CUE domain profile. 518 561 IPR003892 GO:0043130
Spst9g00528 867 MobiDBLite consensus disorder prediction 810 825 - -
Spst9g00528 867 Gene3D - 519 561 - -
Spst9g00528 867 MobiDBLite consensus disorder prediction 784 867 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00528 K18667 - gmx:100778129 1350.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00528 9 4648099 4654533 Spst9g00528 9 4648099 4654533 ECH