Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00498 ATGAAAATGGGGATTTCCAAGACAAGCACTGAGGTTACCGACAATTCCAATAGCAATAGCAATAGCAGCAGCAGCACTCAGACTGAAACTGACAACCATATCTCCATTCCTGCTCCCTACGCCGAAGGAGAGAAGCTCATAGCCACCCACTCCAATCATCTTTACGAAGCCAAGGTTAGGCAAGTTGAGTACCACAACACTGAAGGCTGGCAGTTCCTCGTTCATTATCACGGTTGGAAGAAAAGTTGGGATGAATGGGTTGGCATGGATCGTCTGATGAAACGCACTGAGGAAAATATGCACAAAAAACATGCCCTTGATGAGAATCTTGGCAATGATAAGAATGCGAAAGTCTCACGTGGTCCTCTGGCTAAATCCAAGATTACTAACGTTTCAAGAGGCAGGAAACGACGGAATGAATCTGTCATCAAGCCAAAACCTGATGTTGATCCTGACAAGCTTGTTAGCATTCAAATCCCTCCAACACTGAAGAAACAATTAGTTGATGATTGTGAGTTTATTACCCATCTTGGCAAGCTCGTTAAACTTCCTCGTTCTCCTAATGTGAAAGACATATTGAAAAATTATTTTGATTACAGATTGAAGAAATGTGGCTCAATGGCTGATTCAGTTGAAGAAATTATGAAAGGATTGTGTCGTTACTTTGATAAAGCACTGCCAGTGATACTCTTGTACAAGACCGAGCGCCAACAGTACCAAGAAGCTTGTCCAGCCAATGTCTTTCCTTCTGCTATATATGGTGCTGAGCATTTGTTACGCCTCTTTGTTAAGTTGCCTGAGTTATTGTTCCATGCTAGCATTGAAGAGGAGACATTGATAGAGCTTCAGGCACAGTTACTTGACTTTCTCAGGTTCTTGCAAAAAAACCAGGGTACATTTTTCCTTTCTACTTATCATGTTGCTGAAGATATTAAGAACAGCTCCGACGAATAA 954 0.4182 MKMGISKTSTEVTDNSNSNSNSSSSTQTETDNHISIPAPYAEGEKLIATHSNHLYEAKVRQVEYHNTEGWQFLVHYHGWKKSWDEWVGMDRLMKRTEENMHKKHALDENLGNDKNAKVSRGPLAKSKITNVSRGRKRRNESVIKPKPDVDPDKLVSIQIPPTLKKQLVDDCEFITHLGKLVKLPRSPNVKDILKNYFDYRLKKCGSMADSVEEIMKGLCRYFDKALPVILLYKTERQQYQEACPANVFPSAIYGAEHLLRLFVKLPELLFHASIEEETLIELQAQLLDFLRFLQKNQGTFFLSTYHVAEDIKNSSDE 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00498 317 MobiDBLite consensus disorder prediction 6 33 - -
Spst9g00498 317 Pfam RNA binding activity-knot of a chromodomain 42 92 IPR025995 -
Spst9g00498 317 MobiDBLite consensus disorder prediction 1 33 - -
Spst9g00498 317 ProSiteProfiles MRG domain profile. 151 317 - -
Spst9g00498 317 FunFam Chromatin modification-related protein EAF3 151 314 - -
Spst9g00498 317 Gene3D MRG domain 151 315 IPR038217 -
Spst9g00498 317 MobiDBLite consensus disorder prediction 133 147 - -
Spst9g00498 317 SUPERFAMILY Chromo domain-like 32 175 IPR016197 -
Spst9g00498 317 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 39 309 IPR008676 GO:0005634|GO:0006325|GO:0006355
Spst9g00498 317 Gene3D - 20 122 - -
Spst9g00498 317 MobiDBLite consensus disorder prediction 112 147 - -
Spst9g00498 317 Pfam MRG 148 305 IPR026541 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00498 Spst-Chr9 4469794 4474171 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00498 K11339 - gmx:100777259 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00498 9 4469794 4474171 Spst9g00498 9 4469794 4474171 ECH