Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00483 ATGAGGCAGTGGATACACGTGGCGGTGGCCGCATCCGCGGTGGGATGCGTCTCCACCCTTATGTTGGTCTTTCTCTGGCGTTTGTGTCACAAAAAAAATGGCAGGAAATTCGTTGAACCGGCTAGTTTGACCAGGGTGGAGAGTGTGCAGGGAGGGATATCTGTTTCCAGGCTTCATCAGCAACCTTTTCAGTTGGATCAGGGGAGCAAGAATAGCAACAAGGGTAATTACAATTACTATGTTTTTCGCGGTGGTGGGTTGTCGGGGAAGAGAAGCTTCTTTAATTGGGGTGATCATCCATCCATGGCAGCTGATGCTGTTGAAAATGGATGGTCAAGATTTGCCTTCACGGGGTACAAGAGTTACACTCCGTCTCCTTCGAAAAGATCGGCACTTTTGGGAGCGTGTGCTGCACCGGGAGGAAGTGATTTTGGGAGAGAATCAGAGGCTGAGATAAGCTGGGAAGTGTCACGGGGATCTGCTGAGTTTATGCAGAAGGTGAGAATGAATCCTGGTATAAAAAAATCTCAACAAAACAACAACAATAATGGTTCCCTGGGTGTTGCTTCTATCATTAGAGGGGCTTTGCCTGTGCCTGGACCTCCTCTGGGGAATTGTGCGTTCCCACAAGAAGCATATTTTGAGATTACCATTTTGTACTCACGTGGGGATGAGAGTGAATCTGTTGGGAGGAGTGGGGAAGGTGAGAAGACCAAGCTTTTGGTTCAAGGGAACACCAATGGTAAAGGGAATTCCGAGGCTTTGGCTCATGTTACCAGTGGGAATGGAAGTAATAAAATCAACAATGTTGAAGGGGAGGGTGGGAAAGGTGAATCTGTGATGTTCTCGTTGGGGTTAACAATAGGGGGGTCTGTTCCTTTGAGAGTTCCCGGTAGCTACCCTGGGAGCATTGGCTTCAACTCCAACGGTTCTCTCTATCTTGACGGAATGAAACTTGTACGCGAATCAGAGAAGGCAGAGTGGGTGGGAACTGATAGAGTGATTGGATGTGGATTTGATCCAAGGCAGAAGAAGGTTTTCTTCACAATAGACTCTGATCTAATGCATGTAATCCACTGCCAGACAGAGGAATTTGGCACACCACTTTTTCCAATCATGGCTGCAAATATAGACATTATGGTTTTAGTTAATTTTGGACAAAGTGCATTCAAATATGCACCTGCCAATGCCCAGAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCCCCTGCTGCTACCTTGGGCTATGATGACAGCAAGGAGCTATTCTCAATGGGAAGGATCGATTCTCAGTGGCTCAATCGGTCCACGACCAAAGGAAGCCACAACAACAATAATAATAATAACCATAACAATAATCGAACATTGGATTTTGACGAGGATTCTGAGGCTGATCTATTTGAAATCGTCTTAGATGGTTCTGGAAAATGTCCAAACACGGCATCATAG 1458 0.4609 MRQWIHVAVAASAVGCVSTLMLVFLWRLCHKKNGRKFVEPASLTRVESVQGGISVSRLHQQPFQLDQGSKNSNKGNYNYYVFRGGGLSGKRSFFNWGDHPSMAADAVENGWSRFAFTGYKSYTPSPSKRSALLGACAAPGGSDFGRESEAEISWEVSRGSAEFMQKVRMNPGIKKSQQNNNNNGSLGVASIIRGALPVPGPPLGNCAFPQEAYFEITILYSRGDESESVGRSGEGEKTKLLVQGNTNGKGNSEALAHVTSGNGSNKINNVEGEGGKGESVMFSLGLTIGGSVPLRVPGSYPGSIGFNSNGSLYLDGMKLVRESEKAEWVGTDRVIGCGFDPRQKKVFFTIDSDLMHVIHCQTEEFGTPLFPIMAANIDIMVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATLGYDDSKELFSMGRIDSQWLNRSTTKGSHNNNNNNNHNNNRTLDFDEDSEADLFEIVLDGSGKCPNTAS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00483 485 Gene3D - 165 400 IPR043136 -
Spst9g00483 485 MobiDBLite consensus disorder prediction 438 456 - -
Spst9g00483 485 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Spst9g00483 485 MobiDBLite consensus disorder prediction 438 460 - -
Spst9g00483 485 SUPERFAMILY Concanavalin A-like lectins/glucanases 295 392 IPR013320 -
Spst9g00483 485 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 88 474 IPR043364 GO:0098609
Spst9g00483 485 Pfam SPRY domain 213 387 IPR003877 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00483 Spst-Chr9 4331351 4333251 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00483 - - gmx:100785312 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00483 9 4331351 4333251 Spst9g00483 9 4331351 4333251 ECH