Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00438 ATGGGCGTCCCCGTAGTACTCGGAAGCAGCAGGTGTGGGTCGGGTTGGGAGATATGGACGCAAATCTCCACCGTTAATCTCATCATTGCAATTCAACCACGAGCACGTAAGGGAATTAATATTATAGATATCACCCAACCACCTCATGCCACTGAAATGGATCGAGCCATTCCCGTAAATGATGTGATAACAGCTGTACCCGGAGCAAGTTCCTTTGCTCAACACGTTACAATAATGGTCCAGTTTTCTCTTTCCCCTCTCTCATCCTTTCCACCCTATCCTCTTCCACTGCGACGGCCAATCTTCATCGCTTCTCCACCGACAAACGCCGCTGCTTCCGTCATCGACGCTGTTTCCACGTCCAGCTCCCCTTCCGCTTCCAATTACGCTCCCAAAGTCGTCGTCACCAGAGAGCGCGGCAAGAATGGCAAGCTTATCGACGCTCTGGCTAAATATGAAATCAATTGTTTGGAGCTTCCACTCATTGAGCACACTCAGGGACCTGATTTAGACAGGCTTCCTTCTGTATTAGGTGACAATGCATTTGACTGGGTTGTCATAACTTCTCCTGAGGCAGGTTCAGTCTTTCTAGAGGCATGGAGAACTTCCGGGATGCCTCATGTCAAAGTAGGTGTTGTTGGCACTGGCACTGCAAGCATTTTCAAGGAAGCTTTGCAGTCTTCAAACCGAACCCTTGATATTGCCTTTGTGCCATCAAGAGCAACAGGAAAGGTTTTGGCTACTGAGCTTCCAAAGATTGGAAATAAATGCACCGTTCTCTATCCTGCTTCTGCTAAGGCTAGCAATGAGATTGAGGATGGACTTTCAAACCGTGGATTTGAGGTTACTAGAATGAATACATATACAACGGTGCCCGTTCAACATGTTGATCATATGGTTTTAAAGCTAGCTCTTGCTGCCCCTGTTGTTACGGTAGCTTCACCATCTGCTATTAGTGCCTGGAAGAATCTTCTTTCAGATTCAGAGTGGAACAATTCTGTTGCATGCATTGGTGAGACAACTGCTACAATGGCACGAAGTTTAGGCTTCACAAATGTGTACTACCCTATACAACCCGGCCTAGAAGGCTGGGTAGAAAGCATTCTGGAAGCATTAGGCTCTTATGATGAATTATTAAGGTAG 1143 0.4672 MGVPVVLGSSRCGSGWEIWTQISTVNLIIAIQPRARKGINIIDITQPPHATEMDRAIPVNDVITAVPGASSFAQHVTIMVQFSLSPLSSFPPYPLPLRRPIFIASPPTNAAASVIDAVSTSSSPSASNYAPKVVVTRERGKNGKLIDALAKYEINCLELPLIEHTQGPDLDRLPSVLGDNAFDWVVITSPEAGSVFLEAWRTSGMPHVKVGVVGTGTASIFKEALQSSNRTLDIAFVPSRATGKVLATELPKIGNKCTVLYPASAKASNEIEDGLSNRGFEVTRMNTYTTVPVQHVDHMVLKLALAAPVVTVASPSAISAWKNLLSDSEWNNSVACIGETTATMARSLGFTNVYYPIQPGLEGWVESILEALGSYDELLR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00438 380 Gene3D - 177 282 IPR036108 GO:0004852|GO:0033014
Spst9g00438 380 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 81 374 IPR039793 GO:0004852|GO:0006780
Spst9g00438 380 SUPERFAMILY HemD-like 132 373 IPR036108 GO:0004852|GO:0033014
Spst9g00438 380 Pfam Uroporphyrinogen-III synthase HemD 145 366 IPR003754 GO:0004852|GO:0033014
Spst9g00438 380 FunFam Uroporphyrinogen-III synthase, chloroplastic 176 282 - -
Spst9g00438 380 CDD HemD 133 368 IPR003754 GO:0004852|GO:0033014
Spst9g00438 380 Gene3D - 283 372 IPR036108 GO:0004852|GO:0033014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00438 Spst-Chr9 3883369 3891115 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00438 K01719 - gmx:100808086 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00438 9 3883369 3891115 Spst9g00438 9 3883369 3891115 ECH