Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00430 ATGGGGGCAGAGTCACAAATTCCCCGAAGCTTAATCCACAGAATCTACGCTCCCTTGGCTAACGAATTTCATTTTGCACCTCCATTATCTTCCTCCAGAACAAATGAACTCGAACTCGTGCGGGGTGTTCTACGAATGCTGCAAGGGTTTTCTGGTCCTCTGTTCTCTTGGGATAAAAGCGAAAACAGTTTCCGTGCGAAGAGCGGAGTATACGTCAGCCATCTCTCGCAGAAAAGTCTCCACTCTCTTCTCAACCAGTTTATCCACGCAGCCACGTGTCTCCAATTCGTGGCGATTACACTCGATAAAGTTGAATCTGCAGTGCCAAAGTCTCCTCCTACTTTGAACGCGTTTGCGTCCTCTGCTTCAGCGTGCCTTGAGCGATTGCGGAATCTTGCCTTGAAGGAGGAAACATCCACGAGCAATGCAGATGGAACAACCACTCCAACCTTGTTAGGATTGGCCAATTCCTTATCGAGTCTTTGCTCAGGGGCTGAGTTCCTATTTCAAGTAGTGCATGAGGCCATTCCTGCTGTATACTTTGAGTTTGGTGTGTCTGTACCAGCAGCAGAGCTCACTGTTCACGTGCTTGACTATCTTCATAAGAAGCTTGATGAAATGTGTCTTGTACAAGGTGGTGAGGAGGAAGCTAATCAGATGGTGCTTTATATGTATGTTGGAAGCTTGTTGCCGTACATTGAGGGTCTTGATTCCTGGCTTTTCGAAGGAATTCTAGATGATCCTTTTGGTGAGATGTTCTTTTTCACTAATAAAGAAGTCTCAGTTGACAAGACTGAGTTTTGGGAGAAGAGTTATTTATTAAGAATGCTACAGCATAGCAAGTTAGGTTCAGAATTCTCGTCCACAAATTATGTCAATGATTCAGTGCCAGCATCAAATGACAAGGAAATCAACGGGAGGGATTTCATCTCTTTGTCTGGTACAATTAAAGGAAAAGAGCCAAGCATTATAGACCGTCCAGCTTGTCCTTTTTTTATTAAGGACCTAGCTAAATCAATAATTTCTGCTGGAAAATCTTTGCAGCTGATGCGCCATGTACCTAATTCCTCAGTAAATTGTAGGAAAGAAAGTAATTATGATGTTGGAAGTACCAAATGTTTAAACTATGGTTTATATCCTTCTCAGAGAATGGCTGGGCTGACCTTGCCAGAAGTTTTTTCTGTATCTCTAGTTGGACTTGTTGGTTACAGTGACCATGTCTGTAAGTACTTCTGGCAAGAGAACTGGTATGAATGTGCAACTGTTTCTTACCATGCATCTTATGTAAATGAGGAAAAAACAGATGACAAGAATGAAAAATCAATTACTCCACCTTATTCAGAGAAGACTTGGTATAAGTTATTGATTGATACATTATTTCAGAAAAGATCAGCTGACATGAAGTTAAATTATGAAGACACAAATAATGGCGCATTAGAGCTGAGAGGAACTAGAGTTTTTGAAGATGAAGTGCTTCTCTTGAGGTCATATGTAGAAAATCCAGTTATTACAGTATGTCAAGCAAACCTTGGAATGAATGGGAATGCCTTGAAAACTTTGAATTTATCTCGAAAATTCATCTTGCCTTCATTAAATGATGAGAGTTTAAGAACAGCTATATTTGGTGCAGAAAGTACAGAATTTTCTGACAGTGAAGGGACAAACTATACTTTTGGCTTCCACTTTGGGGAATCCGAATACCTTCGCTCACAGGATGACAGAAAGCTGTTAGAAATGTTGTTTCCTTTTCCCACTATTTTACCTTCATTTCAGGATGATGTTCCTGTGTCAGAGCTATTACCTTTTCAGAGAAACAGCAGTCTTATTTCAAGAGTACTTCGATGGATGCAAAATGTTGACCTAAGAACTACTCCACTTCCTATGGTTATTATGCAGTACTGTCTAACCGTCTACATTCAGAAACAGGTGGATTATATTGGAGTGAATATGTTGTTAAAGTTGATGAATGAATGGAAATTGATGGATGAGCTTGCAGTGTTGCGGGCTATATACTTGCTAGGTTCAGGTGATTTGCTGCAACACTTTTTGACTGTAATTTTCAATAAGTTAGATAAGGGTGAAGCATGGGATGATGATTTTGAATTAAACACAATATTGCAGGAATCAATCAGAAATTCTGCTGATTGTATGCTGTTAAGTGCTCCAGATTCATTGGTAGTGTCAATAACCAAAAGTCGTGTTGACAGTGATGAGGAAGCTAGCACAGCTGGTGTCGTTCAGAGTACTTCTCGTCAAAGTCATGTCAATAGCTTTGGAATTAATGGCCTAGATATGCTCAAATTCACGTATAAGGTCCCTTGGCCACTTGAACTCATTGCAAATACAGAGGCAATTAAGAAGTACAACCAGGTGATGCGGTTCTTGCTGAAGGTCAAGCGTGCAAAATTTGTATTAGATAAAGTGAGGAGATGGATGTGGAAGGGTAGGGGATCTCCTACAAACTACAGAAAGCATCATTGGTTAGTGGAGCAAAAACTCCTTCATTTTGTAGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGTGCTTGGCGTGAACTATGTGAAGGTATGACTGCAGCAAAATCTCTGGATGAAGTCATTGAAGTACATGAGACTTACATTTTATCAATTCAGCGGCAATGCTTTGTGGTTCCTGATAAGCTGGGGGCTCTAATTGCCAGCCGCATCAACAGCATCCTTGGCATAGCTCTAGATTTTTATAACATACAGCAGACATTAAGTAGTGGTGGAGCTGTTTCTGCAATCAAAGCAAGATGTGACATGGAAGTGGACCGGATAGAGAAGCAATTTGATGATTGCATAGCTTTCTTACTTAGGGTTTTATCATTCAAATTAAATGTAGGACACTTCCCTCATCTGGCTGATTTGGTGACCAGAATCAATTACAACTATTTCTACATGTCTGCAAATGGAAATTTGATGACTGCCTCCAGTTCTGGAAGTGTGACCTCAAGGTTGGGCAAGTCCCCTGGATAG 3006 0.4065 MGAESQIPRSLIHRIYAPLANEFHFAPPLSSSRTNELELVRGVLRMLQGFSGPLFSWDKSENSFRAKSGVYVSHLSQKSLHSLLNQFIHAATCLQFVAITLDKVESAVPKSPPTLNAFASSASACLERLRNLALKEETSTSNADGTTTPTLLGLANSLSSLCSGAEFLFQVVHEAIPAVYFEFGVSVPAAELTVHVLDYLHKKLDEMCLVQGGEEEANQMVLYMYVGSLLPYIEGLDSWLFEGILDDPFGEMFFFTNKEVSVDKTEFWEKSYLLRMLQHSKLGSEFSSTNYVNDSVPASNDKEINGRDFISLSGTIKGKEPSIIDRPACPFFIKDLAKSIISAGKSLQLMRHVPNSSVNCRKESNYDVGSTKCLNYGLYPSQRMAGLTLPEVFSVSLVGLVGYSDHVCKYFWQENWYECATVSYHASYVNEEKTDDKNEKSITPPYSEKTWYKLLIDTLFQKRSADMKLNYEDTNNGALELRGTRVFEDEVLLLRSYVENPVITVCQANLGMNGNALKTLNLSRKFILPSLNDESLRTAIFGAESTEFSDSEGTNYTFGFHFGESEYLRSQDDRKLLEMLFPFPTILPSFQDDVPVSELLPFQRNSSLISRVLRWMQNVDLRTTPLPMVIMQYCLTVYIQKQVDYIGVNMLLKLMNEWKLMDELAVLRAIYLLGSGDLLQHFLTVIFNKLDKGEAWDDDFELNTILQESIRNSADCMLLSAPDSLVVSITKSRVDSDEEASTAGVVQSTSRQSHVNSFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKGRGSPTNYRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMTAAKSLDEVIEVHETYILSIQRQCFVVPDKLGALIASRINSILGIALDFYNIQQTLSSGGAVSAIKARCDMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSANGNLMTASSSGSVTSRLGKSPG 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00430 1001 Pfam Gamma tubulin complex component N-terminal 40 365 IPR041470 -
Spst9g00430 1001 Pfam Gamma tubulin complex component C-terminal 660 976 IPR040457 GO:0043015
Spst9g00430 1001 Gene3D - 660 975 IPR042241 -
Spst9g00430 1001 FunFam Gamma-tubulin complex component 660 975 - -
Spst9g00430 1001 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 31 976 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00430 2 707 Glycosyltransferase AT1G20570 48.536 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00430 K16572 - gmx:100782299 1803.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00430 9 3822512 3829315 Spst9g00430 9 3822512 3829315 ECH