Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00397 ATGGAGGCTGAGGCTGAGGCTGAGGCTGAAGCTTCAGTGAGTCACAAGCAGATAACCCCCACAAAAAGTTACCGTTGTTCCCGAATTCTTAGCATTATCCTTTGTGCGAATGGTGTCGAAAAAAGATTTAGTTCCCTCTTTTTCTCAACTTTCCACATCGTTGGTCCTAGATCCACGGCTCTTGTTGCTCCCTTGTGGCGGGAAAGATGGCGCGACAGAAAAGAGAGAGAGAGCAGTGAGTTGGAATTTCCCGTGCTGGAATGGATAGGACAACACCGACGGCAGTTTCGCCTTTTCAGCGCTGAATTGGAAATGCTTGAAGCAATGGAAAGTTCAGTCAATGGTGGGTTTTCCCATTTGCAGAGCTGCGGAGACAGCAGCGAGGAGGAGTTATCGGTGCTGCCACGCCACACCAAAGTAGTGGTAACCGGAAATAATCGCACAAAATCGGTGCTTGTTGGTCTCCAAGGTGTTGTCAAGAAAGCCGTTGGCCTAGGAGGCTGGCATTGGCTTGTTCTAACAAATGGTATTGAAGTGAAGTTGCAAAGGAACGCTCTAAGTGTGATTGAAGCACCCACCGGTAATGAGGAAGATGATGACCTTGAATTTGAAAATATGCAGTGGAATGGATCTGATATGGCATCCGACGACACACAGAAGTCCCACAAATCGAGGCACAGAATGCATAGAACATTGGGATCATCTCACAAGACTATGAGTAGGTCCTTCTCTGGCGATTCACACTCGAAGGGGTCCGTTTCAATGCCTCATGGGTCCGCGAAGGTGGACTTGAGCAAACTTGAAATGGCTGCATTGTGGAGATATTGGCGCCATTTTAATCTTGTGGATGCGGTCCCAAACCCATCGAAAGAGCAGCTTGTAGACGTTGTTCAGAGGCATTTCATGTCGCAGCAAATAGACGAGTTGCAAGTGATTATGGGATTTGTCCAAGCTGCCAAGAGGCTCAAGACCGTGTGCAAATGA 984 0.4807 MEAEAEAEAEASVSHKQITPTKSYRCSRILSIILCANGVEKRFSSLFFSTFHIVGPRSTALVAPLWRERWRDRKERESSELEFPVLEWIGQHRRQFRLFSAELEMLEAMESSVNGGFSHLQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENMQWNGSDMASDDTQKSHKSRHRMHRTLGSSHKTMSRSFSGDSHSKGSVSMPHGSAKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQIDELQVIMGFVQAAKRLKTVCK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00397 327 MobiDBLite consensus disorder prediction 211 258 - -
Spst9g00397 327 Gene3D - 242 327 IPR038291 -
Spst9g00397 327 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 267 320 IPR025718 GO:0005515
Spst9g00397 327 PANTHER SAP30 125 324 IPR024145 -
Spst9g00397 327 MobiDBLite consensus disorder prediction 235 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00397 Spst-Chr9 3529400 3533686 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00397 - - gmx:100809195 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00397 9 3529400 3533686 Spst9g00397 9 3529400 3533686 ECH