Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00380 ATGGCGGCGGAGATACCCTGCTGCGGAACAAAGTTCTCACTGTACGTGTTGGTGATCGTAGGATTGGTTTGTTTCGCGGGCCTAATGGCTGGTCTCACTCTCGGACTCATGTCCCTCGGACTCGTCGACCTCGAAGTTCTCATGAAATCTGGTCGCCCTCAGGATCGAATCCATGCTTCGAAAATTTATCCAGTGGTTAAAAACCAGCATCTTCTGCTTTGCACGCTTCTAATTGGAAACTCCTTAGCCATGGAGACTCTTCCCATTTTTCTTGATGCGCTGGTGCATCCTGCTGCTGCAATCTTGATTTCGGTCACTCTCATCCTCTTGTTTGGAGAGATATTGCCGCAAGCAATTTGCACGAGATATGGATTGACGGTTGGAGCGACGCTGGCTCCACTTGTTCGTGTTCTTCTTCTTGTTTTCTACCCGGTTTCTTATCCAATCAGCAAGGTTCTTGATTGGATGCTGGGTAAAGGACATGCTGCCCTTTTGAAGAGGGCAGAGCTCAAGACTTTTGTGAATTTTCATGGAAATGAGGCCGGTAAAGGAGGAGATTTAACTCATGACGAGACAACCATCATTACTGGGGCACTTGAATTGACAGAGAAGACTGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATCTGGATGCAACTCTAAATTTGGAGACACTGAATTCAATAATGACAATTGGTCATAGCAGAGTTCCGGTTTACGCAGGAGAGAAAACTAATATTATTGGACTTGTTCTGGTGAAAAATCTCTTTATGGTTGATTCAAAGGCTGCAGTTCCTCTAAGAAAAATGGTCATCAGAAAAATTCCTCGTGTTTCAGAGAACATGCCTCTCTATGATATACTGAACGAATTTCAGAAGGGTCATAGTCATATTGCAGTGGTGTATAGGGATCTAAACGGTAAAAACGAGGCCCCCAAAAAGGTTAAAGATGGGGAGCAACATGATCTCAGGGACAACTGTAAGAATAAGGGAGACAATGCACCCTCGGCTAAAGGTTCTAAATTGGAGTCAGGCGATACTTTGATGACTGTTACCAAGGTTGATGGTGCTCAACAAGCAAAGAAAAGTCCACCAGTAACTCCTGCTTTTAAAAAGCGACATAGAGGTTGTTCATATTGCATCCTGGACCTTGATAATTCGCCCCTGCCAGTATTTCCACCCAATGAAGTGGTTGTTGGTGTTATTACGATGGAGGATGTCATCGAAGAGCTTCTTCAGGAGGAGATATTAGATGAAACTGATGAATATGTCAATATCCATAACAAGATAAAAGTTAACATGAATGCTTCAAAGGAGAAGGCCCCTGATGCAAATCTGTTGCAACCTTCTCAAGCAGTTCAAGGACACACACCATCTAATTCAATTTCTACAGCTACTTCTGCAACTGGCTCACCTACCACAATCGATCTAATCTCTGAAAGTGAGTCACTAAGGAATCAATAG 1476 0.4363 MAAEIPCCGTKFSLYVLVIVGLVCFAGLMAGLTLGLMSLGLVDLEVLMKSGRPQDRIHASKIYPVVKNQHLLLCTLLIGNSLAMETLPIFLDALVHPAAAILISVTLILLFGEILPQAICTRYGLTVGATLAPLVRVLLLVFYPVSYPISKVLDWMLGKGHAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIITGALELTEKTAKDAMTPISKAFSLDLDATLNLETLNSIMTIGHSRVPVYAGEKTNIIGLVLVKNLFMVDSKAAVPLRKMVIRKIPRVSENMPLYDILNEFQKGHSHIAVVYRDLNGKNEAPKKVKDGEQHDLRDNCKNKGDNAPSAKGSKLESGDTLMTVTKVDGAQQAKKSPPVTPAFKKRHRGCSYCILDLDNSPLPVFPPNEVVVGVITMEDVIEELLQEEILDETDEYVNIHNKIKVNMNASKEKAPDANLLQPSQAVQGHTPSNSISTATSATGSPTTIDLISESESLRNQ 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00380 491 MobiDBLite consensus disorder prediction 314 347 - -
Spst9g00380 491 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Spst9g00380 491 MobiDBLite consensus disorder prediction 455 491 - -
Spst9g00380 491 Gene3D - 189 323 IPR046342 -
Spst9g00380 491 Gene3D - 369 423 IPR046342 -
Spst9g00380 491 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Spst9g00380 491 FunFam DUF21 domain-containing protein 189 324 - -
Spst9g00380 491 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Spst9g00380 491 SUPERFAMILY CBS-domain pair 196 310 IPR046342 -
Spst9g00380 491 MobiDBLite consensus disorder prediction 314 335 - -
Spst9g00380 491 PANTHER METAL TRANSPORTER CNNM 3 454 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00380 Spst-Chr9 3388218 3392359 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00380 K16302 - gmx:100804572 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00380 9 3388218 3392359 Spst9g00380 9 3388218 3392359 ECH