Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00375 ATGCATGCTCGATATTCAATGGACGGAAACCATGAAATTGGTGTACATGATTTAGGATTGGTGGATTTGCCTGGCAGTGATGGCAGCGAACAGCCACACATATGGTCATCTCCTGAACATGGATTTAAAACTGAAATAGGCAAGCAGATATTCTGTAATCGGTCACTGAATATGAAGAACATCGTTGCTGTGGGATTTGACATGGATTATACTCTGGCACAGTACAAGCCTGAAACTTTTGAATCTCTTGCTTATCAAGGCACAATTAAAAAGCTGGTTTATGATTTGGGATACCCTCGTGAGTTACTAAATTGGTCTTTTAACTGGAAGTACATGGTCAGGGGCTTGGTTCTTGACAAAAAAAGAGGCAACATATTGAAGATGGATCGTCACAAGTATGTGAAAGTAGCCTATCATGGATTTAGAGAGTTGTCAAAAGAAGATAAAGTTGGAACCTATGGAAATACTTTAATACGAGATTCTTTCGATGAACCGGATTATGCTCTAATTGATACTCTCTTTTCACTTGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTCAAGGATTACAATCCTGGCAAGATTCAAGAGGGTGTCGACTATGCTCGCATGTACAAAGATGTTCGAGCTGCAGTTGACTTGTGCCACCGTGATGGAACATTGAAGCAAATGGTTGCTAAAGAACCAAAAAGGTATATTAATGAAGACTCCTCAATAGTGCCCATGCTTGAAATGCTCAGAGACTCTGGTCGTGCCACATTTTTAGTGACAAATAGTTTATGGGACTATACAAACATTGTCATGAATTTCCTCTGTGGATCCAGCACGGCAAATGGCAGTAACAGTTTTTTCTGGCTTCAATACTTTGATGTTGTTATCACTGGCAGTGCAAAGCCAGGTTTTTTTCATGAAGAAAATCGTGCCAACCTATTTGAGGTCGTTCCTGAGACCGGAATGCTTCTCAATACAGATAATGGCTCCCCTATGCCCCAGGTGGGTAATATCTCAGCAAGGTTATTTATAGAAGCAAAGAATCATGCTTGTCCAGTTTTCCAGGGAGGCAATGTTGCTCATCTGCATAAACTGCTTTCCATTGAATCTAGTTCGCAGGTTCTCTACGTTGGGGATCATATTTATGGAGATATATTACGCAGCAAAAAGGTTCTTGGTTGGAGAACAATGCTTGTAGTCCCAGAACTTGAGAAGGAAGTTAAACTCCTCTGGGAATCTAGGGATACCCGCAAGGAACTTCAATTCTTGAGGAGTGAGCGTGACCGCATCGAGGATGAAATACATCATTTGAAGTGGACTCTCAAATTCAAAAATCCAGACGCTGATTTCAAGCAGAAGTTATTATCAGAACTTGGTACATTGGAGCTTGAAAGGGAGAGAGTGAGATTAAGTCATCAAGAAGCTCAGAGAAAATTACATCAAAGGTTTCACGAGCCATGGGGACAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCTTGCCTGTATACTAGCCAAGTATCTAACCTCGGCTTGTATTCTCCAGACAAGTATTACAGACCTAGTGAAGATTTCATGCAGCATGAATTTGGCATTGTGGCTTATGAGACACCAGACTATCCTGGTTTCCATCTCCCTTCTGTCTCTTGGTCATAG 1674 0.4128 MHARYSMDGNHEIGVHDLGLVDLPGSDGSEQPHIWSSPEHGFKTEIGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPRELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFRELSKEDKVGTYGNTLIRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDYNPGKIQEGVDYARMYKDVRAAVDLCHRDGTLKQMVAKEPKRYINEDSSIVPMLEMLRDSGRATFLVTNSLWDYTNIVMNFLCGSSTANGSNSFFWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNISARLFIEAKNHACPVFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVVPELEKEVKLLWESRDTRKELQFLRSERDRIEDEIHHLKWTLKFKNPDADFKQKLLSELGTLELERERVRLSHQEAQRKLHQRFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLGLYSPDKYYRPSEDFMQHEFGIVAYETPDYPGFHLPSVSWS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00375 557 SUPERFAMILY HAD-like 48 537 IPR036412 -
Spst9g00375 557 Gene3D - 210 427 IPR023214 -
Spst9g00375 557 Gene3D - 46 95 IPR023214 -
Spst9g00375 557 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 47 535 IPR008380 -
Spst9g00375 557 Pfam 5' nucleotidase family 50 536 IPR008380 -
Spst9g00375 557 CDD HAD_cN-II 51 422 - -
Spst9g00375 557 Coils Coil 456 476 - -
Spst9g00375 557 Coils Coil 411 438 - -
Spst9g00375 557 PIRSF NT5C2 30 546 IPR016695 -
Spst9g00375 557 FunFam Cytosolic purine 5-nucleotidase 210 427 - -
Spst9g00375 557 NCBIfam HAD-IG family 5'-nucleotidase 50 418 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00375 Spst-Chr9 3364460 3369677 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00375 - - vun:114164304 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00375 9 3364460 3369677 Spst9g00375 9 3364460 3369677 ECH