Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00372 ATGGGCGAACACACCCTAGGTCAAGCACAATCCCTAATCGAACCGCAACCCCACCCCGCTACCTCCTCCTCTGCCGCCATCGTCGTACTCGGAGGCGCTCCGGCGGACCCTGAACTAAACAATGTCCTTCCACACACAAACTCTCCTGCCTCAAAAATCCCCCTCCGTCCCCGCAAGATCCGGAAGGTCTCCCCGGACCCCTCCACATCTGAATCCCAAACCGAAACTACCAAACCGGGCAAGAGCGGCGGCCGGAGCACCAAGCACGTTCCGCAGACGCGAGCCCTTGCTGCGGTGCCGCGCATAGTGGCGCGTTCACTCTCGTGCGAAGGCGAGGTGGAGATCGCGCTCCGATTCCTTCGCAACGCAGACCCTCTCCTCTCCCCTCTAATCGACATTCACCAGCCCCCAACCTTCGACAATTTCCACACTCCCTTCCTCGCATTAACGCGCAGCATCTTGTACCAGCAACTCGCGTACAAAGCAGGCACCTCCATCTACACGCGCTTCATAGCGCTCTGCGGTGGCGAAAACGGTGTTGTTCCGGAAACCGTACTCGCTTTGACTCCCCAACAGCTCCGCCAGATTGGGGTTTCGGGCCGGAAGGCGAGTTACCTTCACGATTTGGCGAGGAAGTACCAGAACGGGATACTCTCCGATTCGGCCATTGTGAACATGGATGATAAGTCCCTCTTCACTATGCTAACTATGGTCAATGGAATTGGCTCTTGGTCTGTTCACATGTTCATGATTTTCTCACTCCATAGACCCGATGTTCTCCCCATCAATGATTTGGGTGTGAGAAAAGGGGTTCAGCTTCTCTATAACCTCGAGGACTTGCCGCGGCCGTCGCAGATGGACCAATTGTGTGAGAAGTGGAGGCCTTATCGCTCTGTGGCTTCGTGGTATATGTGGAGATTTGTTGAAGCCAAAGGAACTCCTTCGAGTGCGGTGGCAGTAGCCACTGGTGCCGGCCTGCAGCAACAGCATCACCACCAGCACCAACAACATGAGCAGCAGCAGCAACAACAACAACATCCTCCACAGCCGCAGCTTGTGGACCCCATAAATAGTATGTTTAATCTCGGGGCGGCCTGTGCTTGGGGGCAATGA 1113 0.5588 MGEHTLGQAQSLIEPQPHPATSSSAAIVVLGGAPADPELNNVLPHTNSPASKIPLRPRKIRKVSPDPSTSESQTETTKPGKSGGRSTKHVPQTRALAAVPRIVARSLSCEGEVEIALRFLRNADPLLSPLIDIHQPPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFIALCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCEKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGAGLQQQHHHQHQQHEQQQQQQQHPPQPQLVDPINSMFNLGAACAWGQ 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00372 370 CDD ENDO3c 146 307 IPR003265 GO:0006284
Spst9g00372 370 SUPERFAMILY DNA-glycosylase 135 307 IPR011257 GO:0003824|GO:0006281
Spst9g00372 370 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 33 317 - -
Spst9g00372 370 MobiDBLite consensus disorder prediction 9 23 - -
Spst9g00372 370 Gene3D Hypothetical protein; domain 2 143 256 - -
Spst9g00372 370 Pfam HhH-GPD superfamily base excision DNA repair protein 151 294 IPR003265 GO:0006284
Spst9g00372 370 MobiDBLite consensus disorder prediction 322 354 - -
Spst9g00372 370 FunFam Probable DNA-3-methyladenine glycosylase 2 242 306 - -
Spst9g00372 370 Gene3D - 120 306 - -
Spst9g00372 370 MobiDBLite consensus disorder prediction 66 89 - -
Spst9g00372 370 SMART endo3end 154 309 IPR003265 GO:0006284
Spst9g00372 370 FunFam DNA-3-methyladenine glycosylase II 142 256 - -
Spst9g00372 370 MobiDBLite consensus disorder prediction 1 92 - -
Spst9g00372 370 MobiDBLite consensus disorder prediction 338 354 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00372 K01247 - gmx:100790760 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00372 9 3350166 3354192 Spst9g00372 9 3350166 3354192 ECH