Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00334 ATGGCAGAAGAAGGGCAAGTGATCGGTATCCACAGTGAGGATGCGTGGAAGGAACATCTGAAGAAGGGAGAAGAATCTAAAAAACTGGTTGTGGTGGATTTCACGGCTTCTTGGTGTGGCCCATGTCGTTTCATTGCCCCATTTGTAGAAGAGCTTGCTAAAAGCCTGACCAATGTCATCTTCCTCAAGGTGGATGTGGATGAATTGAAGAATGTTTGCAGTGAATACGAAATTGAGGCTATGCCAACCTTCCTGTTCTTAAAGGAAGGCAAGGTGGTGGACAAGTTTGTGGGTGCTAAGAAAGATGAACTGCAACTGAAAATAAGCACACATGCAACCTCTGCTGCTTGA 351 0.453 MAEEGQVIGIHSEDAWKEHLKKGEESKKLVVVDFTASWCGPCRFIAPFVEELAKSLTNVIFLKVDVDELKNVCSEYEIEAMPTFLFLKEGKVVDKFVGAKKDELQLKISTHATSAA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00334 116 FunFam Thioredoxin 6 113 - -
Spst9g00334 116 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Spst9g00334 116 SUPERFAMILY Thioredoxin-like 4 110 IPR036249 -
Spst9g00334 116 PANTHER THIOREDOXIN 7 108 - -
Spst9g00334 116 CDD TRX_family 25 108 - -
Spst9g00334 116 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Spst9g00334 116 Gene3D Glutaredoxin 1 115 - -
Spst9g00334 116 PRINTS Thioredoxin family signature 38 47 - -
Spst9g00334 116 PRINTS Thioredoxin family signature 30 38 - -
Spst9g00334 116 PRINTS Thioredoxin family signature 77 88 - -
Spst9g00334 116 Pfam Thioredoxin 10 108 IPR013766 -
Spst9g00334 116 NCBIfam thioredoxin 24 107 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00334 Spst-Chr9 3156201 3156741 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00334 K03671 - gmx:100499879 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00334 9 3156201 3156741 Spst9g00334 9 3156201 3156741 ECH