Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00331 ATGAAATTGTTGTTGTCTCTGATCCTCCTCTTCGCATTTTTCTTGCCTTTCATATCTGCCTCCGACACCTCCGATCTGTTCGAAAGGTGGTGCAAGGAACACGACAAAACCTATTCTTCCGAGGAAGAGAGACGCTACAGGTTCCAAGTCTTCGAGGACAACTATGCCTTTGTCTCCCAACACAACCGGAACGCCAATGATAACAATTCCACCTACACCCTCTCCCTCAACGCTTTCGCCGATCTCACCCACCATGAATTCAAAACCTCGCGCCTCGGTTTTTCCCCTTCCTTGCTTCGATTCAAGCGGGTCCAGAGACGACAACATAGTGAACTGCTACACCTTCCTTCTGAGATCGATTGGAGACAGAGCGGCGCTGTTACACCCGTCAAAGACCAAGCCAGCTGCGGTGCATGTTGGGCGTTCTCAGCTACTGGTGCAATCGAAGGTATAAATAAGATTGTCACAGGGTCTCTTGAAAGCCTTTCTGAACAAGAGTTGATAGATTGTGATACATCCTACAACAGTGGTTGTGAAGGTGGACTCATGGATTATGCGTACCAATTTGTCATTGACAACAAAGGGATCGATACTGAGGATGATTATCCATATCAAGCTCGGCAACGCCCTTGCAGTAAGGACAAGTTAAAAAGGCGCATTGTTACAATTGATGGTTATGTTGATTTGCCTCCGAGTGAGGAAGAGCTACTAAAGGCCGTTGCTTCACAGCCTGTAAGCGTAGGCATATGTGGTAGTGAAAGAGCTTTCCAGTTGTACTCACAGGGTATCTTCTCCGGACCATGTTCAACTTCTTTGGATCATGCAGTATTGATAGTAGGATATGGTTCTGAAAATGGAGTTGATTATTGGATTGTCAAGAATTCATGGGGAAAATATTGGGGAATGAATGGTTACATACACATGATAAGGAACAATGGCGATTCCAAAGGGATATGTGGAATCAACACATTAGCTTCGTATCCTATCAAGACCAAGCCTAATCCTCCTCCTCCTCCAGCTCCTGTAAGATGTAATCTGTTCACTCACTGTTCAGAAGGAGAAACATGTTGCTGTGCCAAGAGCTTTCTTGGAATATGCTTTTCTTGGAAATGCTGTGGGTTAACTTCTGCTGTGTGTTGTAAAGACAAACGGCACTGTTGCCCCCATGATTATCCAATTTGTGATACAGAAAAGGGCCTATGTTTAAAGATTACAAATGGGACAGCAATCACATCGGGGAATCAAGATTTCTCCGACAAGCCAAGAGGCTGGAAATCTCATTGA 1284 0.4494 MKLLLSLILLFAFFLPFISASDTSDLFERWCKEHDKTYSSEEERRYRFQVFEDNYAFVSQHNRNANDNNSTYTLSLNAFADLTHHEFKTSRLGFSPSLLRFKRVQRRQHSELLHLPSEIDWRQSGAVTPVKDQASCGACWAFSATGAIEGINKIVTGSLESLSEQELIDCDTSYNSGCEGGLMDYAYQFVIDNKGIDTEDDYPYQARQRPCSKDKLKRRIVTIDGYVDLPPSEEELLKAVASQPVSVGICGSERAFQLYSQGIFSGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGKYWGMNGYIHMIRNNGDSKGICGINTLASYPIKTKPNPPPPPAPVRCNLFTHCSEGETCCCAKSFLGICFSWKCCGLTSAVCCKDKRHCCPHDYPICDTEKGLCLKITNGTAITSGNQDFSDKPRGWKSH 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00331 427 PRINTS Papain cysteine protease (C1) family signature 289 295 IPR000668 GO:0006508|GO:0008234
Spst9g00331 427 PRINTS Papain cysteine protease (C1) family signature 274 284 IPR000668 GO:0006508|GO:0008234
Spst9g00331 427 PRINTS Papain cysteine protease (C1) family signature 133 148 IPR000668 GO:0006508|GO:0008234
Spst9g00331 427 SMART Inhibitor_I29_2 27 87 IPR013201 -
Spst9g00331 427 SUPERFAMILY Cysteine proteinases 22 329 IPR038765 -
Spst9g00331 427 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 272 282 IPR025660 -
Spst9g00331 427 Pfam Granulin 355 402 IPR000118 -
Spst9g00331 427 FunFam Cysteine protease 1 341 404 - -
Spst9g00331 427 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 23 323 IPR013128 GO:0008234
Spst9g00331 427 SUPERFAMILY Granulin repeat 341 374 - -
Spst9g00331 427 Gene3D Granulin 340 404 IPR037277 -
Spst9g00331 427 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 289 308 IPR025661 -
Spst9g00331 427 CDD Peptidase_C1A 116 328 IPR039417 -
Spst9g00331 427 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 133 144 IPR000169 -
Spst9g00331 427 Pfam Papain family cysteine protease 115 329 IPR000668 GO:0006508|GO:0008234
Spst9g00331 427 Pfam Cathepsin propeptide inhibitor domain (I29) 27 87 IPR013201 -
Spst9g00331 427 Gene3D Cysteine proteinases 17 331 - -
Spst9g00331 427 SMART GRAN_2 344 401 IPR000118 -
Spst9g00331 427 SMART pept_c1 115 329 IPR000668 GO:0006508|GO:0008234
Spst9g00331 427 FunFam Senescence-specific cysteine protease 17 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00331 Spst-Chr9 3144491 3147748 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00331 - - gmx:100805596 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00331 9 3144491 3147748 Spst9g00331 9 3144491 3147748 ECH